Hb_000700_040

Information

Type -
Description -
Location Contig700: 39403-45306
Sequence    

Annotation

kegg
ID tcc:TCM_003027
description UDP-Glycosyltransferase superfamily protein isoform 1
nr
ID XP_007049841.1
description UDP-Glycosyltransferase superfamily protein isoform 4 [Theobroma cacao]
swissprot
ID Q9M8Z7
description Sterol 3-beta-glucosyltransferase UGT80A2 OS=Arabidopsis thaliana GN=UGT80A2 PE=1 SV=1
trembl
ID A0A061DVF1
description UDP-Glycosyltransferase superfamily protein isoform 4 OS=Theobroma cacao GN=TCM_003027 PE=4 SV=1
Gene Ontology
ID GO:0005886
description sterol 3-beta-glucosyltransferase ugt80a2 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000700_040 0.0 - - UDP-Glycosyltransferase superfamily protein isoform 4 [Theobroma cacao]
2 Hb_011344_190 0.0754529737 - - PREDICTED: maspardin [Jatropha curcas]
3 Hb_010560_050 0.0830097093 - - PREDICTED: acyl-protein thioesterase 1-like [Jatropha curcas]
4 Hb_000649_140 0.0870640938 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase setd3 isoform X1 [Jatropha curcas]
5 Hb_002631_010 0.0871066492 - - PREDICTED: V-type proton ATPase catalytic subunit A [Jatropha curcas]
6 Hb_003376_250 0.0875603297 - - Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
7 Hb_003126_070 0.0938394845 - - PREDICTED: 3-dehydroquinate synthase, chloroplastic [Jatropha curcas]
8 Hb_002660_170 0.0968280642 - - PREDICTED: dystrophia myotonica WD repeat-containing protein isoform X2 [Jatropha curcas]
9 Hb_001307_030 0.0997054226 - - PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial [Jatropha curcas]
10 Hb_000928_110 0.1000416066 - - PREDICTED: uncharacterized protein LOC105632499 isoform X1 [Jatropha curcas]
11 Hb_008232_010 0.1000955439 transcription factor TF Family: C2C2-GATA GATA transcription factor, putative [Ricinus communis]
12 Hb_002284_230 0.100331452 - - PREDICTED: uncharacterized protein At5g43822 [Jatropha curcas]
13 Hb_003633_050 0.1010913285 - - hypothetical protein B456_013G125900 [Gossypium raimondii]
14 Hb_000982_080 0.1077567906 desease resistance Gene Name: AAA PREDICTED: 26S proteasome regulatory subunit 4 homolog A [Jatropha curcas]
15 Hb_017131_010 0.110260613 - - PREDICTED: AP-1 complex subunit mu-2 [Jatropha curcas]
16 Hb_007218_120 0.1106134321 - - PREDICTED: pentatricopeptide repeat-containing protein At1g51965, mitochondrial [Jatropha curcas]
17 Hb_000060_050 0.1115665085 - - PREDICTED: uncharacterized protein LOC105649718 [Jatropha curcas]
18 Hb_001222_080 0.1117687591 - - PREDICTED: uncharacterized protein LOC105642435 isoform X1 [Jatropha curcas]
19 Hb_000300_430 0.1119821165 - - PREDICTED: double-stranded RNA-binding protein 1-like [Jatropha curcas]
20 Hb_004800_100 0.1125948258 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000700_040 Hb_000700_040 Hb_011344_190 Hb_011344_190 Hb_000700_040--Hb_011344_190 Hb_010560_050 Hb_010560_050 Hb_000700_040--Hb_010560_050 Hb_000649_140 Hb_000649_140 Hb_000700_040--Hb_000649_140 Hb_002631_010 Hb_002631_010 Hb_000700_040--Hb_002631_010 Hb_003376_250 Hb_003376_250 Hb_000700_040--Hb_003376_250 Hb_003126_070 Hb_003126_070 Hb_000700_040--Hb_003126_070 Hb_000982_080 Hb_000982_080 Hb_011344_190--Hb_000982_080 Hb_011344_190--Hb_003376_250 Hb_008232_010 Hb_008232_010 Hb_011344_190--Hb_008232_010 Hb_005488_200 Hb_005488_200 Hb_011344_190--Hb_005488_200 Hb_003633_050 Hb_003633_050 Hb_011344_190--Hb_003633_050 Hb_001222_080 Hb_001222_080 Hb_011344_190--Hb_001222_080 Hb_010560_050--Hb_002631_010 Hb_000025_190 Hb_000025_190 Hb_010560_050--Hb_000025_190 Hb_010560_050--Hb_003633_050 Hb_001085_240 Hb_001085_240 Hb_010560_050--Hb_001085_240 Hb_000286_060 Hb_000286_060 Hb_010560_050--Hb_000286_060 Hb_003106_100 Hb_003106_100 Hb_000649_140--Hb_003106_100 Hb_002876_020 Hb_002876_020 Hb_000649_140--Hb_002876_020 Hb_001307_030 Hb_001307_030 Hb_000649_140--Hb_001307_030 Hb_011249_020 Hb_011249_020 Hb_000649_140--Hb_011249_020 Hb_000428_060 Hb_000428_060 Hb_000649_140--Hb_000428_060 Hb_008245_010 Hb_008245_010 Hb_002631_010--Hb_008245_010 Hb_000094_210 Hb_000094_210 Hb_002631_010--Hb_000094_210 Hb_002631_010--Hb_000025_190 Hb_017131_010 Hb_017131_010 Hb_002631_010--Hb_017131_010 Hb_003376_250--Hb_000982_080 Hb_003376_250--Hb_005488_200 Hb_001195_200 Hb_001195_200 Hb_003376_250--Hb_001195_200 Hb_000327_180 Hb_000327_180 Hb_003376_250--Hb_000327_180 Hb_007416_060 Hb_007416_060 Hb_003376_250--Hb_007416_060 Hb_076233_040 Hb_076233_040 Hb_003126_070--Hb_076233_040 Hb_002284_230 Hb_002284_230 Hb_003126_070--Hb_002284_230 Hb_003291_020 Hb_003291_020 Hb_003126_070--Hb_003291_020 Hb_000300_430 Hb_000300_430 Hb_003126_070--Hb_000300_430 Hb_003126_070--Hb_008232_010 Hb_001123_160 Hb_001123_160 Hb_003126_070--Hb_001123_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.66597 4.17074 3.46659 12.1358 2.11758 4.11943
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.7937 9.22512 10.1123 10.3893 8.89319

CAGE analysis