Hb_000366_200

Information

Type -
Description -
Location Contig366: 216086-223111
Sequence    

Annotation

kegg
ID rcu:RCOM_0341320
description glycosyltransferase, putative
nr
ID XP_012078588.1
description PREDICTED: dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Jatropha curcas]
swissprot
ID Q9FZ49
description Dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Arabidopsis thaliana GN=ALG9 PE=1 SV=1
trembl
ID A0A067K8T9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14740 PE=4 SV=1
Gene Ontology
ID GO:0000026
description dol-p-man:man c -pp-dol alpha- -mannosyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37688: 216126-223044 , PASA_asmbl_37689: 217435-222742
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000366_200 0.0 - - PREDICTED: dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Jatropha curcas]
2 Hb_002026_150 0.0659944549 transcription factor TF Family: SNF2 PREDICTED: DNA repair helicase XPB1 isoform X1 [Jatropha curcas]
3 Hb_000031_110 0.0724734016 - - Coatomer, beta subunit isoform 1 [Theobroma cacao]
4 Hb_000352_300 0.0904640297 - - PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Jatropha curcas]
5 Hb_002169_050 0.0920761859 - - PREDICTED: inositol 1,3,4-trisphosphate 5/6-kinase 4 [Jatropha curcas]
6 Hb_010174_040 0.0929304801 - - PREDICTED: T-complex protein 1 subunit epsilon [Jatropha curcas]
7 Hb_002909_140 0.0929392794 - - PREDICTED: D-xylose-proton symporter-like 2 [Jatropha curcas]
8 Hb_010294_010 0.0938546841 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B [Jatropha curcas]
9 Hb_000872_010 0.0945245542 - - PREDICTED: putative ubiquitin-conjugating enzyme E2 38 [Jatropha curcas]
10 Hb_001105_020 0.096389877 - - expressed protein, putative [Ricinus communis]
11 Hb_000212_380 0.0971454036 - - Aspartic proteinase Asp1 precursor, putative [Ricinus communis]
12 Hb_003994_150 0.1014190958 - - PREDICTED: pyrophosphate-energized membrane proton pump 2 [Jatropha curcas]
13 Hb_009296_040 0.101487229 - - hypothetical protein L484_007435 [Morus notabilis]
14 Hb_001440_030 0.1020169888 - - PREDICTED: exocyst complex component SEC8 [Jatropha curcas]
15 Hb_001221_080 0.1022542154 - - PREDICTED: conserved oligomeric Golgi complex subunit 2 isoform X2 [Jatropha curcas]
16 Hb_001821_150 0.1024276637 - - PREDICTED: potassium transporter 7-like [Jatropha curcas]
17 Hb_010142_020 0.1034323689 - - conserved hypothetical protein [Ricinus communis]
18 Hb_011016_050 0.1050872299 - - PREDICTED: probable E3 ubiquitin-protein ligase ARI7 isoform X1 [Jatropha curcas]
19 Hb_000230_260 0.105703916 - - PREDICTED: putative E3 ubiquitin-protein ligase RF298 [Jatropha curcas]
20 Hb_021510_010 0.1058562681 - - PREDICTED: deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog [Jatropha curcas]

Gene co-expression network

sample Hb_000366_200 Hb_000366_200 Hb_002026_150 Hb_002026_150 Hb_000366_200--Hb_002026_150 Hb_000031_110 Hb_000031_110 Hb_000366_200--Hb_000031_110 Hb_000352_300 Hb_000352_300 Hb_000366_200--Hb_000352_300 Hb_002169_050 Hb_002169_050 Hb_000366_200--Hb_002169_050 Hb_010174_040 Hb_010174_040 Hb_000366_200--Hb_010174_040 Hb_002909_140 Hb_002909_140 Hb_000366_200--Hb_002909_140 Hb_010142_020 Hb_010142_020 Hb_002026_150--Hb_010142_020 Hb_001105_020 Hb_001105_020 Hb_002026_150--Hb_001105_020 Hb_002026_150--Hb_002169_050 Hb_000011_060 Hb_000011_060 Hb_002026_150--Hb_000011_060 Hb_000614_240 Hb_000614_240 Hb_002026_150--Hb_000614_240 Hb_000159_100 Hb_000159_100 Hb_000031_110--Hb_000159_100 Hb_000872_010 Hb_000872_010 Hb_000031_110--Hb_000872_010 Hb_000784_070 Hb_000784_070 Hb_000031_110--Hb_000784_070 Hb_000264_350 Hb_000264_350 Hb_000031_110--Hb_000264_350 Hb_001440_030 Hb_001440_030 Hb_000031_110--Hb_001440_030 Hb_007481_010 Hb_007481_010 Hb_000352_300--Hb_007481_010 Hb_003528_030 Hb_003528_030 Hb_000352_300--Hb_003528_030 Hb_000184_070 Hb_000184_070 Hb_000352_300--Hb_000184_070 Hb_000477_100 Hb_000477_100 Hb_000352_300--Hb_000477_100 Hb_000046_500 Hb_000046_500 Hb_000352_300--Hb_000046_500 Hb_003683_020 Hb_003683_020 Hb_000352_300--Hb_003683_020 Hb_002169_050--Hb_002909_140 Hb_002169_050--Hb_000614_240 Hb_012498_010 Hb_012498_010 Hb_002169_050--Hb_012498_010 Hb_002169_050--Hb_000011_060 Hb_002169_050--Hb_010142_020 Hb_003645_060 Hb_003645_060 Hb_010174_040--Hb_003645_060 Hb_000592_030 Hb_000592_030 Hb_010174_040--Hb_000592_030 Hb_000617_180 Hb_000617_180 Hb_010174_040--Hb_000617_180 Hb_010174_040--Hb_002909_140 Hb_001655_030 Hb_001655_030 Hb_010174_040--Hb_001655_030 Hb_143629_110 Hb_143629_110 Hb_010174_040--Hb_143629_110 Hb_007803_050 Hb_007803_050 Hb_002909_140--Hb_007803_050 Hb_000212_380 Hb_000212_380 Hb_002909_140--Hb_000212_380 Hb_002909_140--Hb_012498_010 Hb_001221_080 Hb_001221_080 Hb_002909_140--Hb_001221_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.51272 3.30328 4.04385 7.17223 5.97661 4.7035
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.92546 2.45144 7.08533 8.80726 4.85368

CAGE analysis