Hb_004460_040

Information

Type -
Description -
Location Contig4460: 60453-70158
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0005634
description chaperone protein dnaj chloroplastic-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004460_040 0.0 - - -
2 Hb_000752_020 0.1818051995 - - PREDICTED: uncharacterized protein LOC105641803 isoform X1 [Jatropha curcas]
3 Hb_003207_100 0.1838651151 transcription factor TF Family: TCP PREDICTED: transcription factor TCP9-like [Jatropha curcas]
4 Hb_002876_070 0.1942780421 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
5 Hb_000283_100 0.1966033307 - - PREDICTED: E3 ubiquitin protein ligase DRIP2-like isoform X2 [Jatropha curcas]
6 Hb_108802_010 0.1991110776 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Jatropha curcas]
7 Hb_000086_620 0.2010996747 - - PREDICTED: bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [Jatropha curcas]
8 Hb_003119_030 0.2011802043 - - PREDICTED: classical arabinogalactan protein 1-like [Jatropha curcas]
9 Hb_004787_100 0.2041656176 - - PREDICTED: transcription factor bHLH47 [Jatropha curcas]
10 Hb_000532_030 0.2050314455 - - PREDICTED: oxalate--CoA ligase-like [Jatropha curcas]
11 Hb_000103_400 0.2050372781 - - PREDICTED: ATP sulfurylase 1, chloroplastic [Jatropha curcas]
12 Hb_000451_040 0.205306908 - - conserved hypothetical protein [Ricinus communis]
13 Hb_006414_020 0.2059105347 transcription factor TF Family: MYB -
14 Hb_000009_310 0.2064973214 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
15 Hb_000771_070 0.206650872 - - PREDICTED: plastidial pyruvate kinase 4, chloroplastic [Jatropha curcas]
16 Hb_001247_010 0.2080116184 - - galactinol synthase [Manihot esculenta]
17 Hb_000473_080 0.211148611 - - PREDICTED: lipase-like PAD4 [Populus euphratica]
18 Hb_000336_060 0.2129243789 - - hypothetical protein JCGZ_26632 [Jatropha curcas]
19 Hb_003097_090 0.2135431253 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000027_130 0.2164279411 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 [Jatropha curcas]

Gene co-expression network

sample Hb_004460_040 Hb_004460_040 Hb_000752_020 Hb_000752_020 Hb_004460_040--Hb_000752_020 Hb_003207_100 Hb_003207_100 Hb_004460_040--Hb_003207_100 Hb_002876_070 Hb_002876_070 Hb_004460_040--Hb_002876_070 Hb_000283_100 Hb_000283_100 Hb_004460_040--Hb_000283_100 Hb_108802_010 Hb_108802_010 Hb_004460_040--Hb_108802_010 Hb_000086_620 Hb_000086_620 Hb_004460_040--Hb_000086_620 Hb_000027_130 Hb_000027_130 Hb_000752_020--Hb_000027_130 Hb_000771_070 Hb_000771_070 Hb_000752_020--Hb_000771_070 Hb_000473_080 Hb_000473_080 Hb_000752_020--Hb_000473_080 Hb_003529_230 Hb_003529_230 Hb_000752_020--Hb_003529_230 Hb_000252_080 Hb_000252_080 Hb_000752_020--Hb_000252_080 Hb_005814_010 Hb_005814_010 Hb_000752_020--Hb_005814_010 Hb_003207_100--Hb_002876_070 Hb_006846_020 Hb_006846_020 Hb_003207_100--Hb_006846_020 Hb_007007_080 Hb_007007_080 Hb_003207_100--Hb_007007_080 Hb_000272_110 Hb_000272_110 Hb_003207_100--Hb_000272_110 Hb_000038_040 Hb_000038_040 Hb_003207_100--Hb_000038_040 Hb_000069_330 Hb_000069_330 Hb_003207_100--Hb_000069_330 Hb_004586_130 Hb_004586_130 Hb_002876_070--Hb_004586_130 Hb_002876_070--Hb_000272_110 Hb_011930_120 Hb_011930_120 Hb_002876_070--Hb_011930_120 Hb_008020_020 Hb_008020_020 Hb_002876_070--Hb_008020_020 Hb_001246_160 Hb_001246_160 Hb_002876_070--Hb_001246_160 Hb_010126_030 Hb_010126_030 Hb_000283_100--Hb_010126_030 Hb_001989_060 Hb_001989_060 Hb_000283_100--Hb_001989_060 Hb_000283_100--Hb_004586_130 Hb_000045_140 Hb_000045_140 Hb_000283_100--Hb_000045_140 Hb_000680_180 Hb_000680_180 Hb_000283_100--Hb_000680_180 Hb_000336_060 Hb_000336_060 Hb_000283_100--Hb_000336_060 Hb_028841_020 Hb_028841_020 Hb_108802_010--Hb_028841_020 Hb_001568_060 Hb_001568_060 Hb_108802_010--Hb_001568_060 Hb_003119_030 Hb_003119_030 Hb_108802_010--Hb_003119_030 Hb_025030_010 Hb_025030_010 Hb_108802_010--Hb_025030_010 Hb_175087_010 Hb_175087_010 Hb_108802_010--Hb_175087_010 Hb_001021_110 Hb_001021_110 Hb_108802_010--Hb_001021_110 Hb_001623_410 Hb_001623_410 Hb_000086_620--Hb_001623_410 Hb_000086_620--Hb_011930_120 Hb_000086_620--Hb_001989_060 Hb_001247_010 Hb_001247_010 Hb_000086_620--Hb_001247_010 Hb_000086_620--Hb_010126_030 Hb_000451_040 Hb_000451_040 Hb_000086_620--Hb_000451_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.498099 16.6077 7.40665 0.828231 0.262084 0.121651
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.395867 0.435701 1.78012 1.67033 1.11003

CAGE analysis