Hb_004410_040

Information

Type -
Description -
Location Contig4410: 32514-38960
Sequence    

Annotation

kegg
ID rcu:RCOM_1596550
description ATP binding protein, putative
nr
ID XP_002510482.1
description ATP binding protein, putative [Ricinus communis]
swissprot
ID Q8S950
description Kinesin-like protein NACK1 OS=Nicotiana tabacum GN=NACK1 PE=1 SV=1
trembl
ID B9R839
description Kinesin-like protein OS=Ricinus communis GN=RCOM_1596550 PE=3 SV=1
Gene Ontology
ID GO:0005871
description kinesin-like protein nack1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004410_040 0.0 - - ATP binding protein, putative [Ricinus communis]
2 Hb_007002_050 0.2109859302 - - PREDICTED: uncharacterized protein LOC105642607 [Jatropha curcas]
3 Hb_002221_010 0.2151732241 - - PREDICTED: adenylyl-sulfate kinase 3-like [Jatropha curcas]
4 Hb_002942_150 0.2309604801 - - serine carboxypeptidase, putative [Ricinus communis]
5 Hb_011360_130 0.2318878268 - - conserved hypothetical protein [Ricinus communis]
6 Hb_008948_090 0.2387674005 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
7 Hb_000115_190 0.2388816998 - - PREDICTED: uncharacterized protein LOC105642039 [Jatropha curcas]
8 Hb_003638_040 0.2393184884 - - kinesin heavy chain, putative [Ricinus communis]
9 Hb_002701_230 0.2453357723 - - PREDICTED: uncharacterized protein LOC105646833 [Jatropha curcas]
10 Hb_002218_050 0.2461522911 - - SSXT family protein isoform 2, partial [Theobroma cacao]
11 Hb_001279_050 0.2466123437 - - PREDICTED: UPF0392 protein RCOM_0530710 [Jatropha curcas]
12 Hb_005162_120 0.2501289149 - - ferric reductase oxidase [Manihot esculenta]
13 Hb_000215_150 0.2510170729 - - PREDICTED: uncharacterized protein LOC100249186 [Vitis vinifera]
14 Hb_003938_170 0.252548169 - - PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Jatropha curcas]
15 Hb_001061_010 0.2556432987 - - PREDICTED: uncharacterized protein LOC100243595 [Vitis vinifera]
16 Hb_001478_020 0.2583713626 desease resistance Gene Name: AAA thyroid hormone receptor interactor, putative [Ricinus communis]
17 Hb_002232_310 0.2595729873 - - PREDICTED: uncharacterized protein LOC105635987 [Jatropha curcas]
18 Hb_029510_130 0.2609665113 - - PREDICTED: malonate--CoA ligase [Jatropha curcas]
19 Hb_006909_050 0.2629531682 transcription factor TF Family: OFP hypothetical protein POPTR_0008s01840g [Populus trichocarpa]
20 Hb_114292_010 0.2639622662 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_004410_040 Hb_004410_040 Hb_007002_050 Hb_007002_050 Hb_004410_040--Hb_007002_050 Hb_002221_010 Hb_002221_010 Hb_004410_040--Hb_002221_010 Hb_002942_150 Hb_002942_150 Hb_004410_040--Hb_002942_150 Hb_011360_130 Hb_011360_130 Hb_004410_040--Hb_011360_130 Hb_008948_090 Hb_008948_090 Hb_004410_040--Hb_008948_090 Hb_000115_190 Hb_000115_190 Hb_004410_040--Hb_000115_190 Hb_005162_120 Hb_005162_120 Hb_007002_050--Hb_005162_120 Hb_007002_050--Hb_002221_010 Hb_002007_040 Hb_002007_040 Hb_007002_050--Hb_002007_040 Hb_003638_040 Hb_003638_040 Hb_007002_050--Hb_003638_040 Hb_000028_250 Hb_000028_250 Hb_007002_050--Hb_000028_250 Hb_007002_050--Hb_011360_130 Hb_002221_010--Hb_000115_190 Hb_002693_040 Hb_002693_040 Hb_002221_010--Hb_002693_040 Hb_001279_050 Hb_001279_050 Hb_002221_010--Hb_001279_050 Hb_002221_010--Hb_005162_120 Hb_002218_050 Hb_002218_050 Hb_002221_010--Hb_002218_050 Hb_114292_010 Hb_114292_010 Hb_002221_010--Hb_114292_010 Hb_011457_120 Hb_011457_120 Hb_002942_150--Hb_011457_120 Hb_000020_040 Hb_000020_040 Hb_002942_150--Hb_000020_040 Hb_002942_150--Hb_007002_050 Hb_002443_010 Hb_002443_010 Hb_002942_150--Hb_002443_010 Hb_007336_050 Hb_007336_050 Hb_002942_150--Hb_007336_050 Hb_002232_310 Hb_002232_310 Hb_002942_150--Hb_002232_310 Hb_014497_070 Hb_014497_070 Hb_011360_130--Hb_014497_070 Hb_001501_070 Hb_001501_070 Hb_011360_130--Hb_001501_070 Hb_008406_100 Hb_008406_100 Hb_011360_130--Hb_008406_100 Hb_000441_210 Hb_000441_210 Hb_011360_130--Hb_000441_210 Hb_000367_240 Hb_000367_240 Hb_011360_130--Hb_000367_240 Hb_001478_020 Hb_001478_020 Hb_011360_130--Hb_001478_020 Hb_001061_010 Hb_001061_010 Hb_008948_090--Hb_001061_010 Hb_006909_050 Hb_006909_050 Hb_008948_090--Hb_006909_050 Hb_177533_010 Hb_177533_010 Hb_008948_090--Hb_177533_010 Hb_001519_080 Hb_001519_080 Hb_008948_090--Hb_001519_080 Hb_004881_040 Hb_004881_040 Hb_008948_090--Hb_004881_040 Hb_000592_120 Hb_000592_120 Hb_008948_090--Hb_000592_120 Hb_001040_050 Hb_001040_050 Hb_000115_190--Hb_001040_050 Hb_000115_190--Hb_000028_250 Hb_006519_020 Hb_006519_020 Hb_000115_190--Hb_006519_020 Hb_002447_060 Hb_002447_060 Hb_000115_190--Hb_002447_060 Hb_000388_040 Hb_000388_040 Hb_000115_190--Hb_000388_040 Hb_000115_190--Hb_005162_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0136627 0.0135142 0.358092 0.044555 0.00639323 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0121933 0.0465996 0 0.0259851

CAGE analysis