Hb_000367_240

Information

Type -
Description -
Location Contig367: 195106-196247
Sequence    

Annotation

kegg
ID rcu:RCOM_1470710
description hypothetical protein
nr
ID KDP31306.1
description hypothetical protein JCGZ_11682 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K514
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11682 PE=4 SV=1
Gene Ontology
ID GO:0005516
description muscle m-line assembly protein unc-89 isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000367_240 0.0 - - hypothetical protein JCGZ_11682 [Jatropha curcas]
2 Hb_011360_130 0.1354497861 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000748_100 0.1371660519 - - hypothetical protein POPTR_0002s06160g [Populus trichocarpa]
4 Hb_001279_050 0.1432367167 - - PREDICTED: UPF0392 protein RCOM_0530710 [Jatropha curcas]
5 Hb_114292_010 0.1435929492 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001454_180 0.1553950998 - - PREDICTED: uncharacterized protein LOC105643432 [Jatropha curcas]
7 Hb_000347_160 0.1744801222 transcription factor TF Family: Tify JAZ2 [Hevea brasiliensis]
8 Hb_000441_210 0.1756397899 - - PREDICTED: uncharacterized protein LOC105636842 [Jatropha curcas]
9 Hb_002221_010 0.1813835301 - - PREDICTED: adenylyl-sulfate kinase 3-like [Jatropha curcas]
10 Hb_005649_050 0.1818575164 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001935_040 0.1819793296 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 8 [Jatropha curcas]
12 Hb_000365_210 0.1825394729 - - PREDICTED: cell division control protein 2 homolog C [Jatropha curcas]
13 Hb_087793_010 0.1825482684 - - conserved hypothetical protein [Ricinus communis]
14 Hb_008406_100 0.1851253788 - - PREDICTED: protein TPX2 isoform X2 [Jatropha curcas]
15 Hb_004963_020 0.1854784514 - - PREDICTED: patellin-4 [Populus euphratica]
16 Hb_001277_120 0.1877463072 - - PREDICTED: calmodulin-like protein 11 [Jatropha curcas]
17 Hb_004449_160 0.1913266716 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
18 Hb_001761_010 0.1923265788 - - PREDICTED: uncharacterized protein LOC105639282 [Jatropha curcas]
19 Hb_002837_030 0.1942972644 - - conserved hypothetical protein [Ricinus communis]
20 Hb_007558_110 0.1942993785 - - PREDICTED: uncharacterized protein LOC105649093 [Jatropha curcas]

Gene co-expression network

sample Hb_000367_240 Hb_000367_240 Hb_011360_130 Hb_011360_130 Hb_000367_240--Hb_011360_130 Hb_000748_100 Hb_000748_100 Hb_000367_240--Hb_000748_100 Hb_001279_050 Hb_001279_050 Hb_000367_240--Hb_001279_050 Hb_114292_010 Hb_114292_010 Hb_000367_240--Hb_114292_010 Hb_001454_180 Hb_001454_180 Hb_000367_240--Hb_001454_180 Hb_000347_160 Hb_000347_160 Hb_000367_240--Hb_000347_160 Hb_014497_070 Hb_014497_070 Hb_011360_130--Hb_014497_070 Hb_001501_070 Hb_001501_070 Hb_011360_130--Hb_001501_070 Hb_008406_100 Hb_008406_100 Hb_011360_130--Hb_008406_100 Hb_000441_210 Hb_000441_210 Hb_011360_130--Hb_000441_210 Hb_001478_020 Hb_001478_020 Hb_011360_130--Hb_001478_020 Hb_004800_030 Hb_004800_030 Hb_000748_100--Hb_004800_030 Hb_000748_100--Hb_001279_050 Hb_002473_030 Hb_002473_030 Hb_000748_100--Hb_002473_030 Hb_005649_050 Hb_005649_050 Hb_000748_100--Hb_005649_050 Hb_000748_100--Hb_001454_180 Hb_004963_020 Hb_004963_020 Hb_000748_100--Hb_004963_020 Hb_028487_120 Hb_028487_120 Hb_001279_050--Hb_028487_120 Hb_002307_040 Hb_002307_040 Hb_001279_050--Hb_002307_040 Hb_000069_400 Hb_000069_400 Hb_001279_050--Hb_000069_400 Hb_002221_010 Hb_002221_010 Hb_001279_050--Hb_002221_010 Hb_001935_040 Hb_001935_040 Hb_114292_010--Hb_001935_040 Hb_000142_030 Hb_000142_030 Hb_114292_010--Hb_000142_030 Hb_002218_050 Hb_002218_050 Hb_114292_010--Hb_002218_050 Hb_000115_190 Hb_000115_190 Hb_114292_010--Hb_000115_190 Hb_114292_010--Hb_000347_160 Hb_001454_180--Hb_004963_020 Hb_010021_060 Hb_010021_060 Hb_001454_180--Hb_010021_060 Hb_001454_180--Hb_000441_210 Hb_000028_530 Hb_000028_530 Hb_001454_180--Hb_000028_530 Hb_007558_110 Hb_007558_110 Hb_001454_180--Hb_007558_110 Hb_001454_180--Hb_002473_030 Hb_001040_050 Hb_001040_050 Hb_000347_160--Hb_001040_050 Hb_000347_160--Hb_005649_050 Hb_087793_010 Hb_087793_010 Hb_000347_160--Hb_087793_010 Hb_002078_310 Hb_002078_310 Hb_000347_160--Hb_002078_310 Hb_006788_130 Hb_006788_130 Hb_000347_160--Hb_006788_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0690577 0.0854839 2.43816 0.454671 0.0198054 0.0212046
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0451637 0.0355241 0.0657655 0.0855338 0

CAGE analysis