Hb_002078_310

Information

Type -
Description -
Location Contig2078: 224908-226224
Sequence    

Annotation

kegg
ID rcu:RCOM_1079930
description hypothetical protein
nr
ID XP_012085898.1
description PREDICTED: uncharacterized protein LOC105645005 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JVJ0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17966 PE=4 SV=1
Gene Ontology
ID GO:0003824
description PREDICTED: uncharacterized protein LOC105645005

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21455: 225973-226455
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002078_310 0.0 - - PREDICTED: uncharacterized protein LOC105645005 [Jatropha curcas]
2 Hb_011859_010 0.0886080536 - - hypothetical protein VITISV_027923 [Vitis vinifera]
3 Hb_001699_090 0.0978031377 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001564_100 0.1003701396 - - Chromosome-associated kinesin KIF4A, putative [Ricinus communis]
5 Hb_006332_030 0.1039819766 - - RecName: Full=Valine N-monooxygenase 1; AltName: Full=Cytochrome P450 79D1 [Manihot esculenta]
6 Hb_011218_020 0.1072964583 - - conserved hypothetical protein [Ricinus communis]
7 Hb_005649_050 0.1093063812 - - conserved hypothetical protein [Ricinus communis]
8 Hb_028995_020 0.1108835665 - - PREDICTED: uncharacterized protein LOC105642143 [Jatropha curcas]
9 Hb_000424_050 0.1110013555 - - erecta, putative [Ricinus communis]
10 Hb_000084_230 0.1124705827 - - hypothetical protein POPTR_0016s08030g [Populus trichocarpa]
11 Hb_006788_130 0.1125054463 - - PREDICTED: histone H2A variant 1 [Jatropha curcas]
12 Hb_002473_030 0.1142120564 - - PREDICTED: osmotic avoidance abnormal protein 3 [Jatropha curcas]
13 Hb_000364_140 0.1165867742 - - PREDICTED: uncharacterized acetyltransferase At3g50280-like [Jatropha curcas]
14 Hb_000347_160 0.1205326921 transcription factor TF Family: Tify JAZ2 [Hevea brasiliensis]
15 Hb_000175_110 0.1213759992 - - hypothetical protein JCGZ_06125 [Jatropha curcas]
16 Hb_002453_040 0.122822837 - - PREDICTED: uncharacterized protein LOC105636487 [Jatropha curcas]
17 Hb_004800_030 0.1233512876 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP7-like [Jatropha curcas]
18 Hb_000563_110 0.1250762806 - - PREDICTED: uncharacterized protein LOC100306381 isoform X1 [Glycine max]
19 Hb_002837_030 0.1264547925 - - conserved hypothetical protein [Ricinus communis]
20 Hb_004007_080 0.1272982775 - - PREDICTED: BTB/POZ domain-containing protein At3g49900 [Jatropha curcas]

Gene co-expression network

sample Hb_002078_310 Hb_002078_310 Hb_011859_010 Hb_011859_010 Hb_002078_310--Hb_011859_010 Hb_001699_090 Hb_001699_090 Hb_002078_310--Hb_001699_090 Hb_001564_100 Hb_001564_100 Hb_002078_310--Hb_001564_100 Hb_006332_030 Hb_006332_030 Hb_002078_310--Hb_006332_030 Hb_011218_020 Hb_011218_020 Hb_002078_310--Hb_011218_020 Hb_005649_050 Hb_005649_050 Hb_002078_310--Hb_005649_050 Hb_011859_010--Hb_006332_030 Hb_028995_020 Hb_028995_020 Hb_011859_010--Hb_028995_020 Hb_011859_010--Hb_011218_020 Hb_011859_010--Hb_001564_100 Hb_000175_110 Hb_000175_110 Hb_011859_010--Hb_000175_110 Hb_005918_020 Hb_005918_020 Hb_011859_010--Hb_005918_020 Hb_002110_070 Hb_002110_070 Hb_001699_090--Hb_002110_070 Hb_001699_090--Hb_011859_010 Hb_001699_090--Hb_006332_030 Hb_001699_090--Hb_001564_100 Hb_008406_150 Hb_008406_150 Hb_001699_090--Hb_008406_150 Hb_006788_130 Hb_006788_130 Hb_001564_100--Hb_006788_130 Hb_000084_230 Hb_000084_230 Hb_001564_100--Hb_000084_230 Hb_001235_040 Hb_001235_040 Hb_001564_100--Hb_001235_040 Hb_001220_020 Hb_001220_020 Hb_001564_100--Hb_001220_020 Hb_001564_100--Hb_006332_030 Hb_006332_030--Hb_011218_020 Hb_006332_030--Hb_028995_020 Hb_012368_040 Hb_012368_040 Hb_006332_030--Hb_012368_040 Hb_003464_040 Hb_003464_040 Hb_006332_030--Hb_003464_040 Hb_000563_110 Hb_000563_110 Hb_006332_030--Hb_000563_110 Hb_011218_020--Hb_028995_020 Hb_017959_020 Hb_017959_020 Hb_011218_020--Hb_017959_020 Hb_011218_020--Hb_000563_110 Hb_001652_090 Hb_001652_090 Hb_011218_020--Hb_001652_090 Hb_004117_240 Hb_004117_240 Hb_011218_020--Hb_004117_240 Hb_002473_030 Hb_002473_030 Hb_005649_050--Hb_002473_030 Hb_004963_020 Hb_004963_020 Hb_005649_050--Hb_004963_020 Hb_002197_010 Hb_002197_010 Hb_005649_050--Hb_002197_010 Hb_001210_030 Hb_001210_030 Hb_005649_050--Hb_001210_030 Hb_002837_030 Hb_002837_030 Hb_005649_050--Hb_002837_030 Hb_162378_020 Hb_162378_020 Hb_005649_050--Hb_162378_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0235553 0.128748 15.8544 3.1932 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.271542 0.0629711 0.136106 0.560305

CAGE analysis