Hb_006332_030

Information

Type -
Description -
Location Contig6332: 72231-74693
Sequence    

Annotation

kegg
ID egr:104420178
description valine N-monooxygenase 1-like
nr
ID Q9M7B8.1
description RecName: Full=Valine N-monooxygenase 1; AltName: Full=Cytochrome P450 79D1 [Manihot esculenta]
swissprot
ID Q9M7B8
description Valine N-monooxygenase 1 OS=Manihot esculenta GN=CYP79D1 PE=1 SV=1
trembl
ID A0A067KCZ8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18629 PE=3 SV=1
Gene Ontology
ID GO:0005783
description valine n-monooxygenase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51867: 72250-74339
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006332_030 0.0 - - RecName: Full=Valine N-monooxygenase 1; AltName: Full=Cytochrome P450 79D1 [Manihot esculenta]
2 Hb_011218_020 0.04161749 - - conserved hypothetical protein [Ricinus communis]
3 Hb_028995_020 0.0453746033 - - PREDICTED: uncharacterized protein LOC105642143 [Jatropha curcas]
4 Hb_011859_010 0.0639254668 - - hypothetical protein VITISV_027923 [Vitis vinifera]
5 Hb_012368_040 0.0718699091 - - conserved hypothetical protein [Ricinus communis]
6 Hb_003464_040 0.0725562236 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
7 Hb_000563_110 0.0755613291 - - PREDICTED: uncharacterized protein LOC100306381 isoform X1 [Glycine max]
8 Hb_001652_090 0.0775195982 - - conserved hypothetical protein [Ricinus communis]
9 Hb_004117_240 0.0776223417 - - protease inhibitor/seed storage/ltp family [Cicer arietinum]
10 Hb_000175_110 0.0792108705 - - hypothetical protein JCGZ_06125 [Jatropha curcas]
11 Hb_001564_100 0.0806674622 - - Chromosome-associated kinesin KIF4A, putative [Ricinus communis]
12 Hb_000193_170 0.0816592568 transcription factor TF Family: MYB Myb domain 16-like protein [Theobroma cacao]
13 Hb_002453_040 0.0829610591 - - PREDICTED: uncharacterized protein LOC105636487 [Jatropha curcas]
14 Hb_002205_220 0.0862927667 transcription factor TF Family: Orphans two-component system sensor histidine kinase/response regulator, putative [Ricinus communis]
15 Hb_000084_230 0.0912995428 - - hypothetical protein POPTR_0016s08030g [Populus trichocarpa]
16 Hb_000675_130 0.0915379881 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-2-like isoform X2 [Jatropha curcas]
17 Hb_000375_200 0.0928196408 - - cyanohydrin UDP-glucosyltransferase UGT85K5 [Manihot esculenta]
18 Hb_000175_160 0.093883893 - - PREDICTED: protein TOO MANY MOUTHS [Jatropha curcas]
19 Hb_003641_040 0.0942661317 - - hypothetical protein POPTR_0006s14010g [Populus trichocarpa]
20 Hb_017959_020 0.0946247486 - - hypothetical protein POPTR_0011s03440g [Populus trichocarpa]

Gene co-expression network

sample Hb_006332_030 Hb_006332_030 Hb_011218_020 Hb_011218_020 Hb_006332_030--Hb_011218_020 Hb_028995_020 Hb_028995_020 Hb_006332_030--Hb_028995_020 Hb_011859_010 Hb_011859_010 Hb_006332_030--Hb_011859_010 Hb_012368_040 Hb_012368_040 Hb_006332_030--Hb_012368_040 Hb_003464_040 Hb_003464_040 Hb_006332_030--Hb_003464_040 Hb_000563_110 Hb_000563_110 Hb_006332_030--Hb_000563_110 Hb_011218_020--Hb_028995_020 Hb_017959_020 Hb_017959_020 Hb_011218_020--Hb_017959_020 Hb_011218_020--Hb_000563_110 Hb_001652_090 Hb_001652_090 Hb_011218_020--Hb_001652_090 Hb_004117_240 Hb_004117_240 Hb_011218_020--Hb_004117_240 Hb_000175_110 Hb_000175_110 Hb_028995_020--Hb_000175_110 Hb_028995_020--Hb_000563_110 Hb_028995_020--Hb_001652_090 Hb_028995_020--Hb_012368_040 Hb_011859_010--Hb_028995_020 Hb_011859_010--Hb_011218_020 Hb_001564_100 Hb_001564_100 Hb_011859_010--Hb_001564_100 Hb_011859_010--Hb_000175_110 Hb_005918_020 Hb_005918_020 Hb_011859_010--Hb_005918_020 Hb_012368_040--Hb_003464_040 Hb_012368_040--Hb_001652_090 Hb_012368_040--Hb_000563_110 Hb_003226_040 Hb_003226_040 Hb_012368_040--Hb_003226_040 Hb_000193_170 Hb_000193_170 Hb_012368_040--Hb_000193_170 Hb_000375_200 Hb_000375_200 Hb_012368_040--Hb_000375_200 Hb_003464_040--Hb_000193_170 Hb_003464_040--Hb_000375_200 Hb_003464_040--Hb_003226_040 Hb_003464_040--Hb_001652_090 Hb_003464_040--Hb_000563_110 Hb_000563_110--Hb_001652_090 Hb_008642_020 Hb_008642_020 Hb_000563_110--Hb_008642_020 Hb_000563_110--Hb_000175_110 Hb_000005_390 Hb_000005_390 Hb_000563_110--Hb_000005_390 Hb_002045_020 Hb_002045_020 Hb_000563_110--Hb_002045_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.969656 284.818 60.6931 0 0.0473212
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.630533 10.9446

CAGE analysis