Hb_003107_020

Information

Type -
Description -
Location Contig3107: 34243-36076
Sequence    

Annotation

kegg
ID pop:POPTR_0007s05100g
description POPTRDRAFT_654740; Peroxidase 17 precursor family protein
nr
ID KDP29721.1
description hypothetical protein JCGZ_18656 [Jatropha curcas]
swissprot
ID Q9SJZ2
description Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1
trembl
ID A0A067K0K6
description Peroxidase OS=Jatropha curcas GN=JCGZ_18656 PE=3 SV=1
Gene Ontology
ID GO:0004601
description peroxidase 17-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003107_020 0.0 - - hypothetical protein JCGZ_18656 [Jatropha curcas]
2 Hb_007785_010 0.15362376 - - glutathione peroxidase, putative [Ricinus communis]
3 Hb_011716_110 0.1654673589 - - PREDICTED: inactive protein kinase SELMODRAFT_444075 [Jatropha curcas]
4 Hb_001055_030 0.1727427134 - - PREDICTED: F-box/LRR-repeat protein 14 isoform X1 [Jatropha curcas]
5 Hb_008864_040 0.1728737814 - - PREDICTED: pentatricopeptide repeat-containing protein At2g15980 [Jatropha curcas]
6 Hb_002739_150 0.1729145168 - - Uncharacterized protein TCM_016791 [Theobroma cacao]
7 Hb_000120_970 0.1729404884 - - PREDICTED: probable acyl-activating enzyme 2 isoform X2 [Jatropha curcas]
8 Hb_002609_090 0.1750500905 - - PREDICTED: phosphomethylpyrimidine synthase, chloroplastic isoform X2 [Jatropha curcas]
9 Hb_000521_170 0.1763769407 - - PREDICTED: callose synthase 1 [Jatropha curcas]
10 Hb_080451_010 0.176995567 - - PREDICTED: ankyrin repeat-containing protein At2g01680 [Jatropha curcas]
11 Hb_002316_050 0.1778683637 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000457_140 0.1796878043 - - PREDICTED: transmembrane protein 136-like [Jatropha curcas]
13 Hb_003096_040 0.1814131005 transcription factor TF Family: HB hypothetical protein POPTR_0005s07290g [Populus trichocarpa]
14 Hb_000853_030 0.1831501264 - - sucrose synthase 2 [Hevea brasiliensis]
15 Hb_018133_030 0.184869431 - - Heme-binding protein, putative [Ricinus communis]
16 Hb_000123_330 0.1853296571 - - hypothetical protein M569_14136, partial [Genlisea aurea]
17 Hb_164010_070 0.1860976437 - - Paramyosin, putative [Ricinus communis]
18 Hb_001638_040 0.186971971 - - Nucleobase-ascorbate transporter 3 [Glycine soja]
19 Hb_003025_050 0.1871753216 - - PREDICTED: citrate synthase, glyoxysomal [Jatropha curcas]
20 Hb_006683_040 0.1873291329 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]

Gene co-expression network

sample Hb_003107_020 Hb_003107_020 Hb_007785_010 Hb_007785_010 Hb_003107_020--Hb_007785_010 Hb_011716_110 Hb_011716_110 Hb_003107_020--Hb_011716_110 Hb_001055_030 Hb_001055_030 Hb_003107_020--Hb_001055_030 Hb_008864_040 Hb_008864_040 Hb_003107_020--Hb_008864_040 Hb_002739_150 Hb_002739_150 Hb_003107_020--Hb_002739_150 Hb_000120_970 Hb_000120_970 Hb_003107_020--Hb_000120_970 Hb_003640_030 Hb_003640_030 Hb_007785_010--Hb_003640_030 Hb_007785_010--Hb_011716_110 Hb_029977_050 Hb_029977_050 Hb_007785_010--Hb_029977_050 Hb_003073_170 Hb_003073_170 Hb_007785_010--Hb_003073_170 Hb_039342_010 Hb_039342_010 Hb_007785_010--Hb_039342_010 Hb_004162_120 Hb_004162_120 Hb_011716_110--Hb_004162_120 Hb_065500_030 Hb_065500_030 Hb_011716_110--Hb_065500_030 Hb_001544_080 Hb_001544_080 Hb_011716_110--Hb_001544_080 Hb_009897_010 Hb_009897_010 Hb_011716_110--Hb_009897_010 Hb_000599_130 Hb_000599_130 Hb_011716_110--Hb_000599_130 Hb_080451_010 Hb_080451_010 Hb_011716_110--Hb_080451_010 Hb_007894_130 Hb_007894_130 Hb_001055_030--Hb_007894_130 Hb_000236_410 Hb_000236_410 Hb_001055_030--Hb_000236_410 Hb_093084_070 Hb_093084_070 Hb_001055_030--Hb_093084_070 Hb_008143_070 Hb_008143_070 Hb_001055_030--Hb_008143_070 Hb_000009_330 Hb_000009_330 Hb_001055_030--Hb_000009_330 Hb_000622_250 Hb_000622_250 Hb_001055_030--Hb_000622_250 Hb_030827_060 Hb_030827_060 Hb_008864_040--Hb_030827_060 Hb_060237_020 Hb_060237_020 Hb_008864_040--Hb_060237_020 Hb_000086_580 Hb_000086_580 Hb_008864_040--Hb_000086_580 Hb_009028_030 Hb_009028_030 Hb_008864_040--Hb_009028_030 Hb_104265_030 Hb_104265_030 Hb_008864_040--Hb_104265_030 Hb_075449_020 Hb_075449_020 Hb_008864_040--Hb_075449_020 Hb_002739_150--Hb_001055_030 Hb_001638_040 Hb_001638_040 Hb_002739_150--Hb_001638_040 Hb_156850_070 Hb_156850_070 Hb_002739_150--Hb_156850_070 Hb_006663_030 Hb_006663_030 Hb_002739_150--Hb_006663_030 Hb_002739_150--Hb_080451_010 Hb_010831_020 Hb_010831_020 Hb_002739_150--Hb_010831_020 Hb_000107_560 Hb_000107_560 Hb_000120_970--Hb_000107_560 Hb_000120_970--Hb_080451_010 Hb_000521_170 Hb_000521_170 Hb_000120_970--Hb_000521_170 Hb_011828_030 Hb_011828_030 Hb_000120_970--Hb_011828_030 Hb_020178_060 Hb_020178_060 Hb_000120_970--Hb_020178_060 Hb_089100_040 Hb_089100_040 Hb_000120_970--Hb_089100_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.49396 20.9449 1.53032 9.73765 11.1331 7.18079
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.63883 2.08472 2.41285 9.90089 0.342865

CAGE analysis