Hb_003073_170

Information

Type -
Description -
Location Contig3073: 140640-143393
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003073_170 0.0 - - -
2 Hb_151463_010 0.1794920058 - - hypothetical protein B456_004G013100 [Gossypium raimondii]
3 Hb_003107_020 0.1887162966 - - hypothetical protein JCGZ_18656 [Jatropha curcas]
4 Hb_007785_010 0.1943183554 - - glutathione peroxidase, putative [Ricinus communis]
5 Hb_000853_030 0.2054092842 - - sucrose synthase 2 [Hevea brasiliensis]
6 Hb_054885_020 0.2080667727 - - -
7 Hb_001989_020 0.208217619 - - hypothetical protein JCGZ_15521 [Jatropha curcas]
8 Hb_000740_110 0.2085433496 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01850 [Jatropha curcas]
9 Hb_011716_110 0.2112136025 - - PREDICTED: inactive protein kinase SELMODRAFT_444075 [Jatropha curcas]
10 Hb_000987_140 0.220390476 - - PREDICTED: uncharacterized protein LOC105648083 isoform X1 [Jatropha curcas]
11 Hb_008143_070 0.2255532491 - - PREDICTED: factor of DNA methylation 4 [Jatropha curcas]
12 Hb_003157_010 0.2275124853 - - PREDICTED: exocyst complex component EXO70A1 [Jatropha curcas]
13 Hb_000418_070 0.2280039513 - - auxin:hydrogen symporter, putative [Ricinus communis]
14 Hb_002035_080 0.2300127321 - - unnamed protein product [Vitis vinifera]
15 Hb_000733_270 0.2317897789 - - PREDICTED: serine/threonine-protein phosphatase PP1-alpha catalytic subunit [Dasypus novemcinctus]
16 Hb_003157_030 0.2326507995 - - PREDICTED: exocyst complex component EXO70A1-like [Nicotiana sylvestris]
17 Hb_000836_270 0.2327116266 - - PREDICTED: mitogen-activated protein kinase homolog MMK2 [Jatropha curcas]
18 Hb_011716_090 0.2330100033 transcription factor TF Family: HRT putative transciption factor family protein [Populus trichocarpa]
19 Hb_089140_030 0.2338268214 - - PREDICTED: thiol protease aleurain-like [Jatropha curcas]
20 Hb_003211_010 0.2338859516 - - PREDICTED: uncharacterized protein LOC105635705 [Jatropha curcas]

Gene co-expression network

sample Hb_003073_170 Hb_003073_170 Hb_151463_010 Hb_151463_010 Hb_003073_170--Hb_151463_010 Hb_003107_020 Hb_003107_020 Hb_003073_170--Hb_003107_020 Hb_007785_010 Hb_007785_010 Hb_003073_170--Hb_007785_010 Hb_000853_030 Hb_000853_030 Hb_003073_170--Hb_000853_030 Hb_054885_020 Hb_054885_020 Hb_003073_170--Hb_054885_020 Hb_001989_020 Hb_001989_020 Hb_003073_170--Hb_001989_020 Hb_054885_010 Hb_054885_010 Hb_151463_010--Hb_054885_010 Hb_003157_030 Hb_003157_030 Hb_151463_010--Hb_003157_030 Hb_001351_080 Hb_001351_080 Hb_151463_010--Hb_001351_080 Hb_003376_070 Hb_003376_070 Hb_151463_010--Hb_003376_070 Hb_000133_070 Hb_000133_070 Hb_151463_010--Hb_000133_070 Hb_003107_020--Hb_007785_010 Hb_011716_110 Hb_011716_110 Hb_003107_020--Hb_011716_110 Hb_001055_030 Hb_001055_030 Hb_003107_020--Hb_001055_030 Hb_008864_040 Hb_008864_040 Hb_003107_020--Hb_008864_040 Hb_002739_150 Hb_002739_150 Hb_003107_020--Hb_002739_150 Hb_000120_970 Hb_000120_970 Hb_003107_020--Hb_000120_970 Hb_003640_030 Hb_003640_030 Hb_007785_010--Hb_003640_030 Hb_007785_010--Hb_011716_110 Hb_029977_050 Hb_029977_050 Hb_007785_010--Hb_029977_050 Hb_039342_010 Hb_039342_010 Hb_007785_010--Hb_039342_010 Hb_001638_040 Hb_001638_040 Hb_000853_030--Hb_001638_040 Hb_164010_070 Hb_164010_070 Hb_000853_030--Hb_164010_070 Hb_000390_100 Hb_000390_100 Hb_000853_030--Hb_000390_100 Hb_000932_070 Hb_000932_070 Hb_000853_030--Hb_000932_070 Hb_000853_030--Hb_002739_150 Hb_001396_260 Hb_001396_260 Hb_000853_030--Hb_001396_260 Hb_002375_110 Hb_002375_110 Hb_054885_020--Hb_002375_110 Hb_001034_070 Hb_001034_070 Hb_054885_020--Hb_001034_070 Hb_008143_070 Hb_008143_070 Hb_054885_020--Hb_008143_070 Hb_005260_040 Hb_005260_040 Hb_054885_020--Hb_005260_040 Hb_004040_040 Hb_004040_040 Hb_054885_020--Hb_004040_040 Hb_000537_140 Hb_000537_140 Hb_054885_020--Hb_000537_140 Hb_003157_010 Hb_003157_010 Hb_001989_020--Hb_003157_010 Hb_000032_310 Hb_000032_310 Hb_001989_020--Hb_000032_310 Hb_000649_010 Hb_000649_010 Hb_001989_020--Hb_000649_010 Hb_000023_060 Hb_000023_060 Hb_001989_020--Hb_000023_060 Hb_001989_020--Hb_001396_260 Hb_007101_180 Hb_007101_180 Hb_001989_020--Hb_007101_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.28276 9.8313 0.666914 6.43726 5.4398 8.9703
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.06531 0.209323 4.13979 8.00691 0

CAGE analysis