Hb_003157_030

Information

Type -
Description -
Location Contig3157: 43741-44684
Sequence    

Annotation

kegg
ID sot:102595321
description uncharacterized LOC102595321
nr
ID XP_009759024.1
description PREDICTED: exocyst complex component EXO70A1-like [Nicotiana sylvestris]
swissprot
ID Q9UPT5
description Exocyst complex component 7 OS=Homo sapiens GN=EXOC7 PE=1 SV=3
trembl
ID M1CDX3
description Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400025431 PE=4 SV=1
Gene Ontology
ID GO:0000145
description exocyst subunit exo70 family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003157_030 0.0 - - PREDICTED: exocyst complex component EXO70A1-like [Nicotiana sylvestris]
2 Hb_006501_020 0.1101243397 - - PREDICTED: SNW/SKI-interacting protein-like [Jatropha curcas]
3 Hb_002815_060 0.1131251357 - - hypothetical protein B456_002G110500 [Gossypium raimondii]
4 Hb_002742_070 0.1212578997 - - PREDICTED: villin-4-like [Jatropha curcas]
5 Hb_031069_020 0.139448178 - - PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 3-like [Jatropha curcas]
6 Hb_003376_070 0.1437160906 - - hypothetical protein B456_009G419800 [Gossypium raimondii]
7 Hb_141547_010 0.1486783977 - - PREDICTED: ARF guanine-nucleotide exchange factor GNOM [Jatropha curcas]
8 Hb_005144_030 0.1488006638 - - PREDICTED: alpha-L-fucosidase 1 [Jatropha curcas]
9 Hb_011206_010 0.1489583089 - - PREDICTED: something about silencing protein 10 isoform X2 [Vitis vinifera]
10 Hb_003157_010 0.1490222578 - - PREDICTED: exocyst complex component EXO70A1 [Jatropha curcas]
11 Hb_000640_200 0.1493484669 - - hypothetical protein RCOM_1346600 [Ricinus communis]
12 Hb_000808_070 0.1505457387 - - PREDICTED: importin subunit alpha-2 [Jatropha curcas]
13 Hb_006816_410 0.1546959371 - - PREDICTED: eukaryotic translation initiation factor 3 subunit A [Jatropha curcas]
14 Hb_006588_050 0.1564482794 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A [Jatropha curcas]
15 Hb_139859_010 0.1577700903 - - PREDICTED: cell division control protein 48 homolog D-like [Nicotiana sylvestris]
16 Hb_006816_300 0.1579207832 - - PREDICTED: importin subunit alpha-2 [Jatropha curcas]
17 Hb_000108_080 0.1594429337 - - PREDICTED: importin-5 [Jatropha curcas]
18 Hb_001301_230 0.1597035318 - - PREDICTED: uncharacterized protein LOC105632949 isoform X2 [Jatropha curcas]
19 Hb_010128_120 0.1622322523 - - hypothetical protein JCGZ_23167 [Jatropha curcas]
20 Hb_178041_010 0.1647583299 - - PREDICTED: signal peptide peptidase-like 2 [Populus euphratica]

Gene co-expression network

sample Hb_003157_030 Hb_003157_030 Hb_006501_020 Hb_006501_020 Hb_003157_030--Hb_006501_020 Hb_002815_060 Hb_002815_060 Hb_003157_030--Hb_002815_060 Hb_002742_070 Hb_002742_070 Hb_003157_030--Hb_002742_070 Hb_031069_020 Hb_031069_020 Hb_003157_030--Hb_031069_020 Hb_003376_070 Hb_003376_070 Hb_003157_030--Hb_003376_070 Hb_141547_010 Hb_141547_010 Hb_003157_030--Hb_141547_010 Hb_000640_200 Hb_000640_200 Hb_006501_020--Hb_000640_200 Hb_006588_050 Hb_006588_050 Hb_006501_020--Hb_006588_050 Hb_003157_010 Hb_003157_010 Hb_006501_020--Hb_003157_010 Hb_006501_020--Hb_031069_020 Hb_007904_180 Hb_007904_180 Hb_006501_020--Hb_007904_180 Hb_004899_070 Hb_004899_070 Hb_006501_020--Hb_004899_070 Hb_002815_060--Hb_002742_070 Hb_011206_010 Hb_011206_010 Hb_002815_060--Hb_011206_010 Hb_001731_020 Hb_001731_020 Hb_002815_060--Hb_001731_020 Hb_002815_060--Hb_031069_020 Hb_002903_080 Hb_002903_080 Hb_002815_060--Hb_002903_080 Hb_001040_120 Hb_001040_120 Hb_002815_060--Hb_001040_120 Hb_178041_010 Hb_178041_010 Hb_002742_070--Hb_178041_010 Hb_010128_120 Hb_010128_120 Hb_002742_070--Hb_010128_120 Hb_000330_160 Hb_000330_160 Hb_002742_070--Hb_000330_160 Hb_011953_030 Hb_011953_030 Hb_002742_070--Hb_011953_030 Hb_078477_040 Hb_078477_040 Hb_031069_020--Hb_078477_040 Hb_001901_080 Hb_001901_080 Hb_031069_020--Hb_001901_080 Hb_031069_020--Hb_001731_020 Hb_031069_020--Hb_000640_200 Hb_031069_020--Hb_006588_050 Hb_003492_010 Hb_003492_010 Hb_003376_070--Hb_003492_010 Hb_002411_130 Hb_002411_130 Hb_003376_070--Hb_002411_130 Hb_009119_030 Hb_009119_030 Hb_003376_070--Hb_009119_030 Hb_003376_070--Hb_002742_070 Hb_130134_030 Hb_130134_030 Hb_003376_070--Hb_130134_030 Hb_000997_030 Hb_000997_030 Hb_141547_010--Hb_000997_030 Hb_000023_060 Hb_000023_060 Hb_141547_010--Hb_000023_060 Hb_001900_110 Hb_001900_110 Hb_141547_010--Hb_001900_110 Hb_002400_240 Hb_002400_240 Hb_141547_010--Hb_002400_240 Hb_006816_300 Hb_006816_300 Hb_141547_010--Hb_006816_300 Hb_002762_130 Hb_002762_130 Hb_141547_010--Hb_002762_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
66.9107 83.0854 12.4902 40.281 73.3039 179.157
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.825 5.32937 22.1634 44.126 15.3309

CAGE analysis