Hb_178041_010

Information

Type -
Description -
Location Contig178041: 730-921
Sequence    

Annotation

kegg
ID tcc:TCM_016270
description Signal peptide peptidase-like 2 isoform 1
nr
ID XP_011022676.1
description PREDICTED: signal peptide peptidase-like 2 [Populus euphratica]
swissprot
ID Q8W469
description Signal peptide peptidase-like 2 OS=Arabidopsis thaliana GN=SPPL2 PE=2 SV=1
trembl
ID A0A067JZI9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20581 PE=4 SV=1
Gene Ontology
ID GO:0016021
description signal peptide peptidase-like 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_178041_010 0.0 - - PREDICTED: signal peptide peptidase-like 2 [Populus euphratica]
2 Hb_002742_070 0.1199584266 - - PREDICTED: villin-4-like [Jatropha curcas]
3 Hb_051437_010 0.1385336454 - - PREDICTED: calmodulin-interacting protein 111 isoform X2 [Jatropha curcas]
4 Hb_130134_030 0.1457929747 transcription factor TF Family: C3H hypothetical protein JCGZ_14472 [Jatropha curcas]
5 Hb_002815_060 0.1466903329 - - hypothetical protein B456_002G110500 [Gossypium raimondii]
6 Hb_088428_010 0.1505171347 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 homolog [Jatropha curcas]
7 Hb_171788_010 0.1564335438 - - hypothetical protein CISIN_1g007892mg [Citrus sinensis]
8 Hb_000486_060 0.1598793493 - - PREDICTED: immediate early response 3-interacting protein 1-like isoform X2 [Glycine max]
9 Hb_121467_010 0.1606400467 - - tubulin-specific chaperone E, putative [Ricinus communis]
10 Hb_003157_030 0.1647583299 - - PREDICTED: exocyst complex component EXO70A1-like [Nicotiana sylvestris]
11 Hb_003376_070 0.1679598443 - - hypothetical protein B456_009G419800 [Gossypium raimondii]
12 Hb_083043_010 0.171200002 - - PREDICTED: ribonuclease P protein subunit p25-like protein [Jatropha curcas]
13 Hb_011206_010 0.1722294729 - - PREDICTED: something about silencing protein 10 isoform X2 [Vitis vinifera]
14 Hb_009119_030 0.1726739593 - - GMFP4 [Medicago truncatula]
15 Hb_000441_160 0.1757942769 - - ARF GTPase activator, putative [Ricinus communis]
16 Hb_000976_030 0.1771100227 - - PREDICTED: molybdenum cofactor sulfurase-like [Citrus sinensis]
17 Hb_003711_040 0.1790502367 - - PREDICTED: UBX domain-containing protein 4 [Jatropha curcas]
18 Hb_130134_020 0.1791209592 - - -
19 Hb_000159_110 0.1856222471 - - PREDICTED: thioredoxin-like protein YLS8 isoform X2 [Malus domestica]
20 Hb_010128_120 0.1858150637 - - hypothetical protein JCGZ_23167 [Jatropha curcas]

Gene co-expression network

sample Hb_178041_010 Hb_178041_010 Hb_002742_070 Hb_002742_070 Hb_178041_010--Hb_002742_070 Hb_051437_010 Hb_051437_010 Hb_178041_010--Hb_051437_010 Hb_130134_030 Hb_130134_030 Hb_178041_010--Hb_130134_030 Hb_002815_060 Hb_002815_060 Hb_178041_010--Hb_002815_060 Hb_088428_010 Hb_088428_010 Hb_178041_010--Hb_088428_010 Hb_171788_010 Hb_171788_010 Hb_178041_010--Hb_171788_010 Hb_002742_070--Hb_002815_060 Hb_003157_030 Hb_003157_030 Hb_002742_070--Hb_003157_030 Hb_010128_120 Hb_010128_120 Hb_002742_070--Hb_010128_120 Hb_000330_160 Hb_000330_160 Hb_002742_070--Hb_000330_160 Hb_011953_030 Hb_011953_030 Hb_002742_070--Hb_011953_030 Hb_051424_010 Hb_051424_010 Hb_051437_010--Hb_051424_010 Hb_051437_010--Hb_002742_070 Hb_009119_040 Hb_009119_040 Hb_051437_010--Hb_009119_040 Hb_008029_020 Hb_008029_020 Hb_051437_010--Hb_008029_020 Hb_009119_020 Hb_009119_020 Hb_051437_010--Hb_009119_020 Hb_130134_020 Hb_130134_020 Hb_130134_030--Hb_130134_020 Hb_130134_030--Hb_088428_010 Hb_003376_070 Hb_003376_070 Hb_130134_030--Hb_003376_070 Hb_121467_010 Hb_121467_010 Hb_130134_030--Hb_121467_010 Hb_077211_010 Hb_077211_010 Hb_130134_030--Hb_077211_010 Hb_011206_010 Hb_011206_010 Hb_002815_060--Hb_011206_010 Hb_001731_020 Hb_001731_020 Hb_002815_060--Hb_001731_020 Hb_031069_020 Hb_031069_020 Hb_002815_060--Hb_031069_020 Hb_002903_080 Hb_002903_080 Hb_002815_060--Hb_002903_080 Hb_001040_120 Hb_001040_120 Hb_002815_060--Hb_001040_120 Hb_088428_010--Hb_121467_010 Hb_142751_010 Hb_142751_010 Hb_088428_010--Hb_142751_010 Hb_009119_030 Hb_009119_030 Hb_088428_010--Hb_009119_030 Hb_000486_060 Hb_000486_060 Hb_088428_010--Hb_000486_060 Hb_139859_010 Hb_139859_010 Hb_171788_010--Hb_139859_010 Hb_083043_010 Hb_083043_010 Hb_171788_010--Hb_083043_010 Hb_006455_110 Hb_006455_110 Hb_171788_010--Hb_006455_110 Hb_003711_040 Hb_003711_040 Hb_171788_010--Hb_003711_040 Hb_030328_010 Hb_030328_010 Hb_171788_010--Hb_030328_010 Hb_171788_010--Hb_000486_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
269.893 150.531 69.3263 262.337 390.054 1146.75
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
88.9895 17.3983 64.5098 153.277 82.193

CAGE analysis