Hb_002863_090

Information

Type desease resistance
Description Gene Name: Speriolin_N
Location Contig2863: 47574-60101
Sequence    

Annotation

kegg
ID cic:CICLE_v100271722m
description hypothetical protein
nr
ID KDP37135.1
description hypothetical protein JCGZ_06191 [Jatropha curcas]
swissprot
ID Q9SSR8
description Probable disease resistance protein At1g52660 OS=Arabidopsis thaliana GN=At1g52660 PE=3 SV=1
trembl
ID A0A067KXZ2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06191 PE=4 SV=1
Gene Ontology
ID GO:0043531
description nbs type resistance protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002863_090 0.0 desease resistance Gene Name: Speriolin_N hypothetical protein JCGZ_06191 [Jatropha curcas]
2 Hb_000684_130 0.2319948862 - - -
3 Hb_005408_060 0.2575842095 - - PREDICTED: uncharacterized protein LOC105648045 isoform X1 [Jatropha curcas]
4 Hb_133748_010 0.2742971858 - - -
5 Hb_003872_010 0.2756287681 - - hypothetical protein PRUPE_ppa013215mg [Prunus persica]
6 Hb_024698_010 0.2761914547 - - PREDICTED: RING-H2 finger protein ATL46 [Jatropha curcas]
7 Hb_000424_080 0.2771528611 - - PREDICTED: endoglucanase 16 [Jatropha curcas]
8 Hb_097646_010 0.2798487934 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Populus euphratica]
9 Hb_004097_120 0.2806061129 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
10 Hb_002863_100 0.2830615222 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g63020 [Jatropha curcas]
11 Hb_004374_080 0.2833256119 - - PREDICTED: uncharacterized protein LOC105645766 [Jatropha curcas]
12 Hb_013399_080 0.2837507734 - - PREDICTED: protein Brevis radix-like 2 [Jatropha curcas]
13 Hb_001882_130 0.2947314068 transcription factor TF Family: mTERF hypothetical protein VITISV_028996 [Vitis vinifera]
14 Hb_004619_070 0.2956002123 - - hypothetical protein POPTR_0006s00550g [Populus trichocarpa]
15 Hb_100525_010 0.2966184046 - - PREDICTED: disease resistance RPP13-like protein 4 [Populus euphratica]
16 Hb_007749_010 0.3021399919 - - -
17 Hb_000056_010 0.3028070206 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Populus euphratica]
18 Hb_002035_080 0.3042834941 - - unnamed protein product [Vitis vinifera]
19 Hb_001369_710 0.3044662174 - - PREDICTED: uncharacterized protein LOC105648579 isoform X1 [Jatropha curcas]
20 Hb_003376_260 0.3101473201 - - PREDICTED: uncharacterized protein LOC105642207 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_002863_090 Hb_002863_090 Hb_000684_130 Hb_000684_130 Hb_002863_090--Hb_000684_130 Hb_005408_060 Hb_005408_060 Hb_002863_090--Hb_005408_060 Hb_133748_010 Hb_133748_010 Hb_002863_090--Hb_133748_010 Hb_003872_010 Hb_003872_010 Hb_002863_090--Hb_003872_010 Hb_024698_010 Hb_024698_010 Hb_002863_090--Hb_024698_010 Hb_000424_080 Hb_000424_080 Hb_002863_090--Hb_000424_080 Hb_013399_080 Hb_013399_080 Hb_000684_130--Hb_013399_080 Hb_005843_160 Hb_005843_160 Hb_000684_130--Hb_005843_160 Hb_019592_010 Hb_019592_010 Hb_000684_130--Hb_019592_010 Hb_000684_130--Hb_003872_010 Hb_097646_010 Hb_097646_010 Hb_000684_130--Hb_097646_010 Hb_005183_170 Hb_005183_170 Hb_005408_060--Hb_005183_170 Hb_004097_120 Hb_004097_120 Hb_005408_060--Hb_004097_120 Hb_001882_130 Hb_001882_130 Hb_005408_060--Hb_001882_130 Hb_001008_170 Hb_001008_170 Hb_005408_060--Hb_001008_170 Hb_001366_310 Hb_001366_310 Hb_005408_060--Hb_001366_310 Hb_002478_030 Hb_002478_030 Hb_005408_060--Hb_002478_030 Hb_002035_080 Hb_002035_080 Hb_133748_010--Hb_002035_080 Hb_002035_090 Hb_002035_090 Hb_133748_010--Hb_002035_090 Hb_002863_100 Hb_002863_100 Hb_133748_010--Hb_002863_100 Hb_000098_020 Hb_000098_020 Hb_133748_010--Hb_000098_020 Hb_010531_050 Hb_010531_050 Hb_133748_010--Hb_010531_050 Hb_001622_010 Hb_001622_010 Hb_133748_010--Hb_001622_010 Hb_004374_080 Hb_004374_080 Hb_003872_010--Hb_004374_080 Hb_007803_060 Hb_007803_060 Hb_003872_010--Hb_007803_060 Hb_000270_870 Hb_000270_870 Hb_003872_010--Hb_000270_870 Hb_002000_060 Hb_002000_060 Hb_003872_010--Hb_002000_060 Hb_000661_110 Hb_000661_110 Hb_003872_010--Hb_000661_110 Hb_147505_010 Hb_147505_010 Hb_003872_010--Hb_147505_010 Hb_000056_010 Hb_000056_010 Hb_024698_010--Hb_000056_010 Hb_003376_260 Hb_003376_260 Hb_024698_010--Hb_003376_260 Hb_024698_010--Hb_097646_010 Hb_003001_040 Hb_003001_040 Hb_024698_010--Hb_003001_040 Hb_005048_140 Hb_005048_140 Hb_024698_010--Hb_005048_140 Hb_116420_040 Hb_116420_040 Hb_024698_010--Hb_116420_040 Hb_001001_050 Hb_001001_050 Hb_000424_080--Hb_001001_050 Hb_145655_010 Hb_145655_010 Hb_000424_080--Hb_145655_010 Hb_022174_010 Hb_022174_010 Hb_000424_080--Hb_022174_010 Hb_002235_270 Hb_002235_270 Hb_000424_080--Hb_002235_270 Hb_000640_140 Hb_000640_140 Hb_000424_080--Hb_000640_140 Hb_000979_010 Hb_000979_010 Hb_000424_080--Hb_000979_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.814172 0.436631 0.101352 0.634064 0.125192 0.432531
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.328367 0 0.457209

CAGE analysis