Hb_002791_030

Information

Type -
Description -
Location Contig2791: 29083-32944
Sequence    

Annotation

kegg
ID rcu:RCOM_1299540
description glutathione-s-transferase theta, gst, putative (EC:5.2.1.2)
nr
ID XP_002519388.1
description glutathione-s-transferase theta, gst, putative [Ricinus communis]
swissprot
ID P57108
description Glutathione S-transferase zeta class OS=Euphorbia esula PE=2 SV=1
trembl
ID B9S069
description Glutathione-s-transferase theta, gst, putative OS=Ricinus communis GN=RCOM_1299540 PE=3 SV=1
Gene Ontology
ID GO:0005737
description glutathione s-transferase zeta class-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29129: 30508-30917
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002791_030 0.0 - - glutathione-s-transferase theta, gst, putative [Ricinus communis]
2 Hb_004668_060 0.0936432271 - - PREDICTED: probable apyrase 6 isoform X1 [Jatropha curcas]
3 Hb_001377_160 0.0972944556 - - PREDICTED: protein SDE2 homolog [Jatropha curcas]
4 Hb_000398_020 0.1000262084 - - PREDICTED: superkiller viralicidic activity 2-like 2 isoform X1 [Jatropha curcas]
5 Hb_000318_120 0.1015208657 transcription factor TF Family: SWI/SNF-BAF60b PREDICTED: DNA ligase 1 isoform X2 [Jatropha curcas]
6 Hb_000261_100 0.1041781996 - - PREDICTED: beta-galactosidase 9 isoform X2 [Jatropha curcas]
7 Hb_007558_070 0.1046714409 - - PREDICTED: pre-mRNA-processing factor 39 isoform X2 [Jatropha curcas]
8 Hb_007635_040 0.1052536605 - - PREDICTED: WAT1-related protein At3g45870 isoform X1 [Jatropha curcas]
9 Hb_000236_400 0.1056849348 - - hypothetical protein JCGZ_01058 [Jatropha curcas]
10 Hb_002837_060 0.1061306933 - - PREDICTED: uncharacterized protein At1g10890-like [Nelumbo nucifera]
11 Hb_143629_150 0.1077508767 - - PREDICTED: flap endonuclease 1 isoform X2 [Prunus mume]
12 Hb_001235_140 0.108288759 - - PREDICTED: protein arginine N-methyltransferase 1.6 [Jatropha curcas]
13 Hb_002311_290 0.1087579236 - - PREDICTED: pumilio homolog 24 [Jatropha curcas]
14 Hb_002447_120 0.1093897808 - - hypothetical protein O988_01801, partial [Pseudogymnoascus pannorum VKM F-3808]
15 Hb_004109_230 0.1094524423 - - heat shock protein binding protein, putative [Ricinus communis]
16 Hb_001442_060 0.1107186203 - - PREDICTED: uncharacterized protein LOC105638091 isoform X1 [Jatropha curcas]
17 Hb_000679_330 0.1116945056 - - PREDICTED: E3 ubiquitin-protein ligase KEG [Jatropha curcas]
18 Hb_001085_110 0.1121428398 - - T6D22.2 [Arabidopsis thaliana]
19 Hb_007123_030 0.1125129059 - - PREDICTED: uncharacterized protein LOC105634056 isoform X3 [Jatropha curcas]
20 Hb_141069_010 0.113566617 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002791_030 Hb_002791_030 Hb_004668_060 Hb_004668_060 Hb_002791_030--Hb_004668_060 Hb_001377_160 Hb_001377_160 Hb_002791_030--Hb_001377_160 Hb_000398_020 Hb_000398_020 Hb_002791_030--Hb_000398_020 Hb_000318_120 Hb_000318_120 Hb_002791_030--Hb_000318_120 Hb_000261_100 Hb_000261_100 Hb_002791_030--Hb_000261_100 Hb_007558_070 Hb_007558_070 Hb_002791_030--Hb_007558_070 Hb_004668_060--Hb_001377_160 Hb_007508_080 Hb_007508_080 Hb_004668_060--Hb_007508_080 Hb_001033_050 Hb_001033_050 Hb_004668_060--Hb_001033_050 Hb_000139_130 Hb_000139_130 Hb_004668_060--Hb_000139_130 Hb_005503_040 Hb_005503_040 Hb_004668_060--Hb_005503_040 Hb_000046_070 Hb_000046_070 Hb_004668_060--Hb_000046_070 Hb_003943_010 Hb_003943_010 Hb_001377_160--Hb_003943_010 Hb_003120_080 Hb_003120_080 Hb_001377_160--Hb_003120_080 Hb_000398_080 Hb_000398_080 Hb_001377_160--Hb_000398_080 Hb_003498_120 Hb_003498_120 Hb_001377_160--Hb_003498_120 Hb_001377_160--Hb_000139_130 Hb_000648_080 Hb_000648_080 Hb_000398_020--Hb_000648_080 Hb_000398_020--Hb_007558_070 Hb_000406_230 Hb_000406_230 Hb_000398_020--Hb_000406_230 Hb_002000_070 Hb_002000_070 Hb_000398_020--Hb_002000_070 Hb_000236_400 Hb_000236_400 Hb_000398_020--Hb_000236_400 Hb_004976_010 Hb_004976_010 Hb_000398_020--Hb_004976_010 Hb_055235_020 Hb_055235_020 Hb_000318_120--Hb_055235_020 Hb_000134_270 Hb_000134_270 Hb_000318_120--Hb_000134_270 Hb_003943_020 Hb_003943_020 Hb_000318_120--Hb_003943_020 Hb_000523_080 Hb_000523_080 Hb_000318_120--Hb_000523_080 Hb_007044_110 Hb_007044_110 Hb_000318_120--Hb_007044_110 Hb_000563_420 Hb_000563_420 Hb_000318_120--Hb_000563_420 Hb_000780_190 Hb_000780_190 Hb_000261_100--Hb_000780_190 Hb_000284_230 Hb_000284_230 Hb_000261_100--Hb_000284_230 Hb_000035_410 Hb_000035_410 Hb_000261_100--Hb_000035_410 Hb_004701_050 Hb_004701_050 Hb_000261_100--Hb_004701_050 Hb_000183_050 Hb_000183_050 Hb_000261_100--Hb_000183_050 Hb_004109_370 Hb_004109_370 Hb_000261_100--Hb_004109_370 Hb_007558_070--Hb_000406_230 Hb_000191_130 Hb_000191_130 Hb_007558_070--Hb_000191_130 Hb_023344_010 Hb_023344_010 Hb_007558_070--Hb_023344_010 Hb_000917_160 Hb_000917_160 Hb_007558_070--Hb_000917_160 Hb_000010_360 Hb_000010_360 Hb_007558_070--Hb_000010_360
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
29.0979 37.6674 23.3129 38.1968 47.1306 34.2241
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
34.0136 16.5303 7.10651 34.7364 33.2189

CAGE analysis