Hb_002498_260

Information

Type -
Description -
Location Contig2498: 153469-156240
Sequence    

Annotation

kegg
ID rcu:RCOM_0904280
description lactoylglutathione lyase, putative (EC:4.4.1.5)
nr
ID XP_012091330.1
description PREDICTED: putative lactoylglutathione lyase [Jatropha curcas]
swissprot
ID Q39366
description Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera PE=2 SV=1
trembl
ID A0A067JAG7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21208 PE=4 SV=1
Gene Ontology
ID GO:0004462
description lactoylglutathione lyase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_26008: 153509-156090
cDNA
(Sanger)
(ID:Location)		 008_B24.ab1: 153509-155984 , 016_A10.ab1: 153509-155962

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002498_260 0.0 - - PREDICTED: putative lactoylglutathione lyase [Jatropha curcas]
2 Hb_048476_060 0.1700501908 - - PREDICTED: CRAL-TRIO domain-containing protein YKL091C-like isoform X2 [Jatropha curcas]
3 Hb_005054_220 0.1745701905 - - PREDICTED: peroxisomal nicotinamide adenine dinucleotide carrier isoform X1 [Jatropha curcas]
4 Hb_001999_100 0.1752546684 - - PREDICTED: UDP-glycosyltransferase 71D1-like [Jatropha curcas]
5 Hb_000008_190 0.1753572098 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Jatropha curcas]
6 Hb_148130_020 0.175613571 - - -
7 Hb_003669_010 0.1791538585 - - PREDICTED: psbP domain-containing protein 5, chloroplastic [Populus euphratica]
8 Hb_010042_020 0.1821966862 - - UDP-n-acteylglucosamine pyrophosphorylase, putative [Ricinus communis]
9 Hb_000622_350 0.1827872291 - - PREDICTED: protein ABIL1 [Jatropha curcas]
10 Hb_001486_040 0.1829234379 - - PREDICTED: uncharacterized protein LOC105632624 isoform X1 [Jatropha curcas]
11 Hb_000016_060 0.1843887686 - - mads box protein, putative [Ricinus communis]
12 Hb_004525_040 0.1862419114 - - PREDICTED: sugar transporter ERD6-like 6 [Jatropha curcas]
13 Hb_010984_040 0.1869959517 - - hypothetical protein M569_17286, partial [Genlisea aurea]
14 Hb_003071_070 0.1873226759 - - sucrose synthase 3 [Hevea brasiliensis]
15 Hb_000028_600 0.1877002294 - - glutaredoxin-1, grx1, putative [Ricinus communis]
16 Hb_000004_010 0.190735895 - - hypothetical protein Csa_6G120400 [Cucumis sativus]
17 Hb_122636_010 0.191284344 - - dienelactone hydrolase family protein [Populus trichocarpa]
18 Hb_000720_080 0.1921265078 - - PREDICTED: bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 [Jatropha curcas]
19 Hb_002960_130 0.1922426663 - - hypothetical protein B456_008G036100 [Gossypium raimondii]
20 Hb_007390_020 0.1938016614 - - PREDICTED: protein FMP32, mitochondrial-like [Populus euphratica]

Gene co-expression network

sample Hb_002498_260 Hb_002498_260 Hb_048476_060 Hb_048476_060 Hb_002498_260--Hb_048476_060 Hb_005054_220 Hb_005054_220 Hb_002498_260--Hb_005054_220 Hb_001999_100 Hb_001999_100 Hb_002498_260--Hb_001999_100 Hb_000008_190 Hb_000008_190 Hb_002498_260--Hb_000008_190 Hb_148130_020 Hb_148130_020 Hb_002498_260--Hb_148130_020 Hb_003669_010 Hb_003669_010 Hb_002498_260--Hb_003669_010 Hb_002193_060 Hb_002193_060 Hb_048476_060--Hb_002193_060 Hb_185830_060 Hb_185830_060 Hb_048476_060--Hb_185830_060 Hb_003207_020 Hb_003207_020 Hb_048476_060--Hb_003207_020 Hb_000110_050 Hb_000110_050 Hb_048476_060--Hb_000110_050 Hb_000402_130 Hb_000402_130 Hb_048476_060--Hb_000402_130 Hb_002007_320 Hb_002007_320 Hb_048476_060--Hb_002007_320 Hb_007390_020 Hb_007390_020 Hb_005054_220--Hb_007390_020 Hb_004117_190 Hb_004117_190 Hb_005054_220--Hb_004117_190 Hb_005754_040 Hb_005754_040 Hb_005054_220--Hb_005754_040 Hb_003540_050 Hb_003540_050 Hb_005054_220--Hb_003540_050 Hb_004055_050 Hb_004055_050 Hb_005054_220--Hb_004055_050 Hb_000539_050 Hb_000539_050 Hb_005054_220--Hb_000539_050 Hb_001481_150 Hb_001481_150 Hb_001999_100--Hb_001481_150 Hb_006569_060 Hb_006569_060 Hb_001999_100--Hb_006569_060 Hb_002660_110 Hb_002660_110 Hb_001999_100--Hb_002660_110 Hb_033152_070 Hb_033152_070 Hb_001999_100--Hb_033152_070 Hb_001999_100--Hb_000008_190 Hb_026740_020 Hb_026740_020 Hb_001999_100--Hb_026740_020 Hb_118507_010 Hb_118507_010 Hb_000008_190--Hb_118507_010 Hb_002486_050 Hb_002486_050 Hb_000008_190--Hb_002486_050 Hb_001195_410 Hb_001195_410 Hb_000008_190--Hb_001195_410 Hb_004126_040 Hb_004126_040 Hb_000008_190--Hb_004126_040 Hb_000008_190--Hb_002660_110 Hb_000008_190--Hb_001481_150 Hb_002781_030 Hb_002781_030 Hb_148130_020--Hb_002781_030 Hb_010042_020 Hb_010042_020 Hb_148130_020--Hb_010042_020 Hb_148130_020--Hb_033152_070 Hb_000928_190 Hb_000928_190 Hb_148130_020--Hb_000928_190 Hb_000258_240 Hb_000258_240 Hb_148130_020--Hb_000258_240 Hb_148130_020--Hb_000008_190 Hb_045770_010 Hb_045770_010 Hb_003669_010--Hb_045770_010 Hb_003758_020 Hb_003758_020 Hb_003669_010--Hb_003758_020 Hb_000004_010 Hb_000004_010 Hb_003669_010--Hb_000004_010 Hb_008566_040 Hb_008566_040 Hb_003669_010--Hb_008566_040 Hb_002960_150 Hb_002960_150 Hb_003669_010--Hb_002960_150 Hb_003020_210 Hb_003020_210 Hb_003669_010--Hb_003020_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.18668 6.50183 25.6455 90.1795 4.6251 18.1094
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
37.0535 10.9662 5.6994 20.1997 24.3538

CAGE analysis