Hb_118507_010

Information

Type -
Description -
Location Contig118507: 514-976
Sequence    

Annotation

kegg
ID vvi:100242320
description mitogen-activated protein kinase homolog MMK1
nr
ID CAN72393.1
description hypothetical protein VITISV_019292 [Vitis vinifera]
swissprot
ID Q40532
description Mitogen-activated protein kinase homolog NTF4 OS=Nicotiana tabacum GN=NTF4 PE=2 SV=1
trembl
ID A5BIY2
description Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019292 PE=4 SV=1
Gene Ontology
ID GO:0005622
description mitogen-activated protein kinase homolog mmk1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_118507_010 0.0 - - hypothetical protein VITISV_019292 [Vitis vinifera]
2 Hb_001195_410 0.0830109969 - - PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase [Jatropha curcas]
3 Hb_000008_190 0.1001646242 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Jatropha curcas]
4 Hb_005539_310 0.1114339424 - - basic helix-loop-helix-containing protein, putative [Ricinus communis]
5 Hb_004480_020 0.1192872706 - - PREDICTED: uncharacterized protein LOC105637166 [Jatropha curcas]
6 Hb_005535_080 0.1300059871 - - hypothetical protein CICLE_v10012766mg [Citrus clementina]
7 Hb_001124_110 0.1360355269 - - PREDICTED: sodium/hydrogen exchanger 2-like isoform X2 [Jatropha curcas]
8 Hb_086639_080 0.1401585772 - - conserved hypothetical protein [Ricinus communis]
9 Hb_002486_050 0.1418882676 - - Multiple inositol polyphosphate phosphatase 1 precursor, putative [Ricinus communis]
10 Hb_003209_130 0.1421848684 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
11 Hb_000002_480 0.1432432325 - - PREDICTED: protein WVD2-like 1 isoform X2 [Jatropha curcas]
12 Hb_000622_110 0.1433327725 - - cmp-sialic acid transporter, putative [Ricinus communis]
13 Hb_007286_020 0.1443080289 - - hypothetical protein L484_010675 [Morus notabilis]
14 Hb_083628_010 0.1446508796 - - PREDICTED: probable serine protease EDA2 [Jatropha curcas]
15 Hb_004987_020 0.1460434454 - - -
16 Hb_009247_010 0.1462524539 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
17 Hb_010789_020 0.1466018553 - - ubiquitin-conjugating enzyme e2S, putative [Ricinus communis]
18 Hb_000172_510 0.1474136108 - - hypothetical protein B456_007G243100 [Gossypium raimondii]
19 Hb_066514_010 0.147541836 - - hypothetical protein RCOM_0204720 [Ricinus communis]
20 Hb_000134_120 0.1521565393 - - PREDICTED: uncharacterized protein LOC105628669 [Jatropha curcas]

Gene co-expression network

sample Hb_118507_010 Hb_118507_010 Hb_001195_410 Hb_001195_410 Hb_118507_010--Hb_001195_410 Hb_000008_190 Hb_000008_190 Hb_118507_010--Hb_000008_190 Hb_005539_310 Hb_005539_310 Hb_118507_010--Hb_005539_310 Hb_004480_020 Hb_004480_020 Hb_118507_010--Hb_004480_020 Hb_005535_080 Hb_005535_080 Hb_118507_010--Hb_005535_080 Hb_001124_110 Hb_001124_110 Hb_118507_010--Hb_001124_110 Hb_001195_410--Hb_000008_190 Hb_004453_070 Hb_004453_070 Hb_001195_410--Hb_004453_070 Hb_012760_050 Hb_012760_050 Hb_001195_410--Hb_012760_050 Hb_000172_510 Hb_000172_510 Hb_001195_410--Hb_000172_510 Hb_000776_060 Hb_000776_060 Hb_001195_410--Hb_000776_060 Hb_002486_050 Hb_002486_050 Hb_000008_190--Hb_002486_050 Hb_004126_040 Hb_004126_040 Hb_000008_190--Hb_004126_040 Hb_002660_110 Hb_002660_110 Hb_000008_190--Hb_002660_110 Hb_001481_150 Hb_001481_150 Hb_000008_190--Hb_001481_150 Hb_001217_040 Hb_001217_040 Hb_005539_310--Hb_001217_040 Hb_004987_020 Hb_004987_020 Hb_005539_310--Hb_004987_020 Hb_000991_040 Hb_000991_040 Hb_005539_310--Hb_000991_040 Hb_063716_090 Hb_063716_090 Hb_005539_310--Hb_063716_090 Hb_000260_600 Hb_000260_600 Hb_005539_310--Hb_000260_600 Hb_004480_020--Hb_001481_150 Hb_007286_020 Hb_007286_020 Hb_004480_020--Hb_007286_020 Hb_007137_050 Hb_007137_050 Hb_004480_020--Hb_007137_050 Hb_000023_300 Hb_000023_300 Hb_004480_020--Hb_000023_300 Hb_000085_450 Hb_000085_450 Hb_004480_020--Hb_000085_450 Hb_001097_040 Hb_001097_040 Hb_004480_020--Hb_001097_040 Hb_003209_130 Hb_003209_130 Hb_005535_080--Hb_003209_130 Hb_005381_020 Hb_005381_020 Hb_005535_080--Hb_005381_020 Hb_005535_080--Hb_002486_050 Hb_000395_040 Hb_000395_040 Hb_005535_080--Hb_000395_040 Hb_000622_110 Hb_000622_110 Hb_005535_080--Hb_000622_110 Hb_007919_110 Hb_007919_110 Hb_005535_080--Hb_007919_110 Hb_088163_010 Hb_088163_010 Hb_001124_110--Hb_088163_010 Hb_135757_010 Hb_135757_010 Hb_001124_110--Hb_135757_010 Hb_029695_050 Hb_029695_050 Hb_001124_110--Hb_029695_050 Hb_000077_290 Hb_000077_290 Hb_001124_110--Hb_000077_290 Hb_066514_010 Hb_066514_010 Hb_001124_110--Hb_066514_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.05781 10.7945 11.253 36.7489 6.2516 7.15765
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.18452 6.35417 4.06327 8.7474 3.49659

CAGE analysis