Hb_066514_010

Information

Type -
Description -
Location Contig66514: 265-687
Sequence    

Annotation

kegg
ID rcu:RCOM_0204720
description hypothetical protein
nr
ID XP_002527961.1
description hypothetical protein RCOM_0204720 [Ricinus communis]
swissprot
ID Q949W6
description Protein KAKU4 OS=Arabidopsis thaliana GN=KAKU4 PE=1 SV=1
trembl
ID B9SPP2
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0204720 PE=4 SV=1
Gene Ontology
ID GO:0005794
description flocculation protein flo11-like isoform x3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_066514_010 0.0 - - hypothetical protein RCOM_0204720 [Ricinus communis]
2 Hb_002900_100 0.097649959 - - PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Jatropha curcas]
3 Hb_011918_010 0.1205155914 - - hypothetical protein glysoja_041948 [Glycine soja]
4 Hb_007441_090 0.1408405521 - - nucleoside diphosphate kinase 1 [Hevea brasiliensis]
5 Hb_002490_030 0.1460096766 - - conserved hypothetical protein [Ricinus communis]
6 Hb_118507_010 0.147541836 - - hypothetical protein VITISV_019292 [Vitis vinifera]
7 Hb_000302_100 0.1483408163 - - PREDICTED: uncharacterized protein LOC105766209 [Gossypium raimondii]
8 Hb_007575_090 0.1507328233 - - putative. proteolipid subunit of vacuolar H+ ATPase, partial [Zea mays]
9 Hb_002272_200 0.1528769115 - - PREDICTED: GDSL esterase/lipase At1g54790 isoform X1 [Jatropha curcas]
10 Hb_000816_190 0.1532061282 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002675_090 0.1540947086 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001124_110 0.1615665014 - - PREDICTED: sodium/hydrogen exchanger 2-like isoform X2 [Jatropha curcas]
13 Hb_000300_230 0.1662339932 - - PREDICTED: cation/calcium exchanger 2 [Jatropha curcas]
14 Hb_000740_090 0.1664595558 - - conserved hypothetical protein [Ricinus communis]
15 Hb_004525_080 0.1699767682 - - Sugar transporter ERD6-like 6 [Morus notabilis]
16 Hb_001195_410 0.1702372139 - - PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase [Jatropha curcas]
17 Hb_000008_190 0.1710692257 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Jatropha curcas]
18 Hb_008185_020 0.1714322547 - - RING-H2 finger protein ATL3J, putative [Ricinus communis]
19 Hb_184541_010 0.1730874488 - - PREDICTED: selT-like protein [Jatropha curcas]
20 Hb_160405_010 0.17511869 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]

Gene co-expression network

sample Hb_066514_010 Hb_066514_010 Hb_002900_100 Hb_002900_100 Hb_066514_010--Hb_002900_100 Hb_011918_010 Hb_011918_010 Hb_066514_010--Hb_011918_010 Hb_007441_090 Hb_007441_090 Hb_066514_010--Hb_007441_090 Hb_002490_030 Hb_002490_030 Hb_066514_010--Hb_002490_030 Hb_118507_010 Hb_118507_010 Hb_066514_010--Hb_118507_010 Hb_000302_100 Hb_000302_100 Hb_066514_010--Hb_000302_100 Hb_002900_100--Hb_002490_030 Hb_000816_190 Hb_000816_190 Hb_002900_100--Hb_000816_190 Hb_002675_090 Hb_002675_090 Hb_002900_100--Hb_002675_090 Hb_002900_100--Hb_011918_010 Hb_006907_050 Hb_006907_050 Hb_002900_100--Hb_006907_050 Hb_007575_090 Hb_007575_090 Hb_011918_010--Hb_007575_090 Hb_184541_010 Hb_184541_010 Hb_011918_010--Hb_184541_010 Hb_004125_070 Hb_004125_070 Hb_011918_010--Hb_004125_070 Hb_011918_010--Hb_002490_030 Hb_106688_010 Hb_106688_010 Hb_007441_090--Hb_106688_010 Hb_165402_010 Hb_165402_010 Hb_007441_090--Hb_165402_010 Hb_018691_010 Hb_018691_010 Hb_007441_090--Hb_018691_010 Hb_017159_010 Hb_017159_010 Hb_007441_090--Hb_017159_010 Hb_001708_010 Hb_001708_010 Hb_007441_090--Hb_001708_010 Hb_002272_200 Hb_002272_200 Hb_002490_030--Hb_002272_200 Hb_124951_020 Hb_124951_020 Hb_002490_030--Hb_124951_020 Hb_002490_030--Hb_000816_190 Hb_001366_170 Hb_001366_170 Hb_002490_030--Hb_001366_170 Hb_001195_410 Hb_001195_410 Hb_118507_010--Hb_001195_410 Hb_000008_190 Hb_000008_190 Hb_118507_010--Hb_000008_190 Hb_005539_310 Hb_005539_310 Hb_118507_010--Hb_005539_310 Hb_004480_020 Hb_004480_020 Hb_118507_010--Hb_004480_020 Hb_005535_080 Hb_005535_080 Hb_118507_010--Hb_005535_080 Hb_001124_110 Hb_001124_110 Hb_118507_010--Hb_001124_110 Hb_000302_100--Hb_002272_200 Hb_001357_030 Hb_001357_030 Hb_000302_100--Hb_001357_030 Hb_160405_010 Hb_160405_010 Hb_000302_100--Hb_160405_010 Hb_000302_100--Hb_007575_090 Hb_001329_020 Hb_001329_020 Hb_000302_100--Hb_001329_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.9721 21.9778 23.5219 104.958 9.86107 15.9589
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.93575 6.51185 3.98025 14.6319 7.94718

CAGE analysis