Hb_007575_090

Information

Type -
Description -
Location Contig7575: 131799-132476
Sequence    

Annotation

kegg
ID mus:103979397
description V-type proton ATPase 16 kDa proteolipid subunit-like
nr
ID AAA18550.1
description putative. proteolipid subunit of vacuolar H+ ATPase, partial [Zea mays]
swissprot
ID Q41773
description V-type proton ATPase 16 kDa proteolipid subunit (Fragment) OS=Zea mays PE=2 SV=2
trembl
ID M0SFX7
description Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1
Gene Ontology
ID GO:0005774
description v-type proton atpase 16 kda proteolipid subunit

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007575_090 0.0 - - putative. proteolipid subunit of vacuolar H+ ATPase, partial [Zea mays]
2 Hb_011918_010 0.1077357776 - - hypothetical protein glysoja_041948 [Glycine soja]
3 Hb_007741_090 0.1169336243 - - Autophagy-related 8f -like protein [Gossypium arboreum]
4 Hb_066514_010 0.1507328233 - - hypothetical protein RCOM_0204720 [Ricinus communis]
5 Hb_002900_100 0.1577790724 - - PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Jatropha curcas]
6 Hb_000302_110 0.1628890287 - - UDP-glucosyltransferase, putative [Ricinus communis]
7 Hb_004117_330 0.1636554177 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000521_070 0.1648152025 - - PREDICTED: uncharacterized protein LOC105650323 [Jatropha curcas]
9 Hb_184541_010 0.1661441402 - - PREDICTED: selT-like protein [Jatropha curcas]
10 Hb_002490_030 0.1689130626 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002272_200 0.1695412588 - - PREDICTED: GDSL esterase/lipase At1g54790 isoform X1 [Jatropha curcas]
12 Hb_004525_080 0.1711322733 - - Sugar transporter ERD6-like 6 [Morus notabilis]
13 Hb_000302_100 0.1738849866 - - PREDICTED: uncharacterized protein LOC105766209 [Gossypium raimondii]
14 Hb_054865_160 0.181967401 - - PREDICTED: D-arabinono-1,4-lactone oxidase-like [Jatropha curcas]
15 Hb_008185_020 0.1821717485 - - RING-H2 finger protein ATL3J, putative [Ricinus communis]
16 Hb_000816_190 0.1838432299 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001486_050 0.1844730591 - - PREDICTED: arabinogalactan peptide 13-like [Jatropha curcas]
18 Hb_000236_210 0.1871899499 - - hypothetical protein JCGZ_01083 [Jatropha curcas]
19 Hb_004925_030 0.1872252616 - - EXORDIUM like 1 [Theobroma cacao]
20 Hb_074836_020 0.1941230981 - - unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_007575_090 Hb_007575_090 Hb_011918_010 Hb_011918_010 Hb_007575_090--Hb_011918_010 Hb_007741_090 Hb_007741_090 Hb_007575_090--Hb_007741_090 Hb_066514_010 Hb_066514_010 Hb_007575_090--Hb_066514_010 Hb_002900_100 Hb_002900_100 Hb_007575_090--Hb_002900_100 Hb_000302_110 Hb_000302_110 Hb_007575_090--Hb_000302_110 Hb_004117_330 Hb_004117_330 Hb_007575_090--Hb_004117_330 Hb_011918_010--Hb_066514_010 Hb_184541_010 Hb_184541_010 Hb_011918_010--Hb_184541_010 Hb_011918_010--Hb_002900_100 Hb_004125_070 Hb_004125_070 Hb_011918_010--Hb_004125_070 Hb_002490_030 Hb_002490_030 Hb_011918_010--Hb_002490_030 Hb_000521_070 Hb_000521_070 Hb_007741_090--Hb_000521_070 Hb_007741_090--Hb_000302_110 Hb_007741_090--Hb_184541_010 Hb_007741_090--Hb_011918_010 Hb_004925_030 Hb_004925_030 Hb_007741_090--Hb_004925_030 Hb_066514_010--Hb_002900_100 Hb_007441_090 Hb_007441_090 Hb_066514_010--Hb_007441_090 Hb_066514_010--Hb_002490_030 Hb_118507_010 Hb_118507_010 Hb_066514_010--Hb_118507_010 Hb_000302_100 Hb_000302_100 Hb_066514_010--Hb_000302_100 Hb_002900_100--Hb_002490_030 Hb_000816_190 Hb_000816_190 Hb_002900_100--Hb_000816_190 Hb_002675_090 Hb_002675_090 Hb_002900_100--Hb_002675_090 Hb_006907_050 Hb_006907_050 Hb_002900_100--Hb_006907_050 Hb_000302_110--Hb_004925_030 Hb_000302_110--Hb_000521_070 Hb_002582_080 Hb_002582_080 Hb_000302_110--Hb_002582_080 Hb_156850_040 Hb_156850_040 Hb_000302_110--Hb_156850_040 Hb_000413_080 Hb_000413_080 Hb_004117_330--Hb_000413_080 Hb_005144_170 Hb_005144_170 Hb_004117_330--Hb_005144_170 Hb_008185_020 Hb_008185_020 Hb_004117_330--Hb_008185_020 Hb_004117_330--Hb_000302_100 Hb_004117_330--Hb_066514_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.11558 35.5745 44.6811 309.366 17.692 32.2345
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.1407 7.16507 4.04951 17.193 8.45926

CAGE analysis