Hb_000302_110

Information

Type -
Description -
Location Contig302: 80743-81551
Sequence    

Annotation

kegg
ID rcu:RCOM_1581890
description UDP-glucosyltransferase, putative (EC:2.4.1.218)
nr
ID XP_002513630.1
description UDP-glucosyltransferase, putative [Ricinus communis]
swissprot
ID Q9LK73
description UDP-glycosyltransferase 88A1 OS=Arabidopsis thaliana GN=UGT88A1 PE=2 SV=1
trembl
ID B9RIR1
description UDP-glucosyltransferase, putative OS=Ricinus communis GN=RCOM_1581890 PE=3 SV=1
Gene Ontology
ID GO:0050505
description udp-glycosyltransferase 88a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000302_110 0.0 - - UDP-glucosyltransferase, putative [Ricinus communis]
2 Hb_004925_030 0.0693189878 - - EXORDIUM like 1 [Theobroma cacao]
3 Hb_000521_070 0.1509945885 - - PREDICTED: uncharacterized protein LOC105650323 [Jatropha curcas]
4 Hb_002582_080 0.1550851674 - - -
5 Hb_007575_090 0.1628890287 - - putative. proteolipid subunit of vacuolar H+ ATPase, partial [Zea mays]
6 Hb_007741_090 0.1649717859 - - Autophagy-related 8f -like protein [Gossypium arboreum]
7 Hb_156850_040 0.1906069378 - - PREDICTED: uncharacterized protein LOC105635251 [Jatropha curcas]
8 Hb_011918_010 0.200433625 - - hypothetical protein glysoja_041948 [Glycine soja]
9 Hb_000302_100 0.2012810626 - - PREDICTED: uncharacterized protein LOC105766209 [Gossypium raimondii]
10 Hb_009010_040 0.2047725701 - - Peptide transporter, putative [Ricinus communis]
11 Hb_004125_070 0.2068380975 - - Glycolipid transfer protein, putative [Ricinus communis]
12 Hb_000236_210 0.2111505731 - - hypothetical protein JCGZ_01083 [Jatropha curcas]
13 Hb_001486_050 0.2142641342 - - PREDICTED: arabinogalactan peptide 13-like [Jatropha curcas]
14 Hb_000532_090 0.218587136 - - ATPase [delta proteobacterium MLMS-1]
15 Hb_184541_010 0.2201100536 - - PREDICTED: selT-like protein [Jatropha curcas]
16 Hb_009111_060 0.2202817865 - - PREDICTED: sodium transporter HKT1-like [Jatropha curcas]
17 Hb_000959_180 0.2208099637 - - hypothetical protein JCGZ_09448 [Jatropha curcas]
18 Hb_104169_010 0.2260068474 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
19 Hb_002030_190 0.2267156407 - - conserved hypothetical protein [Ricinus communis]
20 Hb_002277_020 0.2268882565 - - Uncharacterized protein TCM_002409 [Theobroma cacao]

Gene co-expression network

sample Hb_000302_110 Hb_000302_110 Hb_004925_030 Hb_004925_030 Hb_000302_110--Hb_004925_030 Hb_000521_070 Hb_000521_070 Hb_000302_110--Hb_000521_070 Hb_002582_080 Hb_002582_080 Hb_000302_110--Hb_002582_080 Hb_007575_090 Hb_007575_090 Hb_000302_110--Hb_007575_090 Hb_007741_090 Hb_007741_090 Hb_000302_110--Hb_007741_090 Hb_156850_040 Hb_156850_040 Hb_000302_110--Hb_156850_040 Hb_004925_030--Hb_000521_070 Hb_004925_030--Hb_007741_090 Hb_004925_030--Hb_002582_080 Hb_004925_030--Hb_156850_040 Hb_000236_210 Hb_000236_210 Hb_004925_030--Hb_000236_210 Hb_000521_070--Hb_007741_090 Hb_000521_070--Hb_007575_090 Hb_002030_190 Hb_002030_190 Hb_000521_070--Hb_002030_190 Hb_000206_270 Hb_000206_270 Hb_000521_070--Hb_000206_270 Hb_000302_100 Hb_000302_100 Hb_002582_080--Hb_000302_100 Hb_011918_010 Hb_011918_010 Hb_002582_080--Hb_011918_010 Hb_034299_070 Hb_034299_070 Hb_002582_080--Hb_034299_070 Hb_001329_020 Hb_001329_020 Hb_002582_080--Hb_001329_020 Hb_007575_090--Hb_011918_010 Hb_007575_090--Hb_007741_090 Hb_066514_010 Hb_066514_010 Hb_007575_090--Hb_066514_010 Hb_002900_100 Hb_002900_100 Hb_007575_090--Hb_002900_100 Hb_004117_330 Hb_004117_330 Hb_007575_090--Hb_004117_330 Hb_184541_010 Hb_184541_010 Hb_007741_090--Hb_184541_010 Hb_007741_090--Hb_011918_010 Hb_001322_010 Hb_001322_010 Hb_156850_040--Hb_001322_010 Hb_000860_030 Hb_000860_030 Hb_156850_040--Hb_000860_030 Hb_000638_110 Hb_000638_110 Hb_156850_040--Hb_000638_110 Hb_022597_010 Hb_022597_010 Hb_156850_040--Hb_022597_010 Hb_002277_020 Hb_002277_020 Hb_156850_040--Hb_002277_020 Hb_003582_010 Hb_003582_010 Hb_156850_040--Hb_003582_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.69635 7.39641 3.6124 89.8005 2.59601 3.85018
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.59303 1.87875 3.17646 4.5483 1.02293

CAGE analysis