Hb_002188_140

Information

Type -
Description -
Location Contig2188: 175809-176959
Sequence    

Annotation

kegg
ID rcu:RCOM_1383280
description hypothetical protein
nr
ID XP_012093162.1
description PREDICTED: uncharacterized protein LOC105650814 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L7Z7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16375 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002188_140 0.0 - - PREDICTED: uncharacterized protein LOC105650814 [Jatropha curcas]
2 Hb_063405_020 0.2245620536 - - PREDICTED: uncharacterized protein LOC105155919 [Sesamum indicum]
3 Hb_015690_010 0.2442036706 desease resistance Gene Name: NB-ARC hypothetical protein CISIN_1g038521mg [Citrus sinensis]
4 Hb_000175_020 0.2461878314 - - conserved hypothetical protein [Ricinus communis]
5 Hb_062671_010 0.2761016015 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
6 Hb_000828_050 0.2769218573 - - unnamed protein product [Vitis vinifera]
7 Hb_000230_030 0.2778915301 - - hypothetical protein B456_013G2021001, partial [Gossypium raimondii]
8 Hb_000061_090 0.2880773546 - - hypothetical protein B456_003G0981001, partial [Gossypium raimondii]
9 Hb_002131_030 0.2883734184 - - PREDICTED: pyruvate kinase isozyme G, chloroplastic [Jatropha curcas]
10 Hb_012760_110 0.2896718105 - - PREDICTED: methyltransferase-like protein 23 isoform X1 [Jatropha curcas]
11 Hb_000203_140 0.2903982404 - - PREDICTED: peroxisome biogenesis protein 7 [Jatropha curcas]
12 Hb_011310_080 0.2907033752 - - hypothetical protein POPTR_0006s26840g [Populus trichocarpa]
13 Hb_083820_010 0.2937385606 - - hypothetical protein JCGZ_20198 [Jatropha curcas]
14 Hb_000001_130 0.2951979407 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
15 Hb_000122_210 0.2980904932 - - -
16 Hb_004136_030 0.3019555666 - - -
17 Hb_027760_090 0.3045424206 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
18 Hb_003185_100 0.3092314446 - - hypothetical protein JCGZ_07188 [Jatropha curcas]
19 Hb_002112_010 0.3096035485 - - hypothetical protein POPTR_0001s45830g [Populus trichocarpa]
20 Hb_007199_010 0.3106560429 - - PREDICTED: protein kinase APK1A, chloroplastic [Nelumbo nucifera]

Gene co-expression network

sample Hb_002188_140 Hb_002188_140 Hb_063405_020 Hb_063405_020 Hb_002188_140--Hb_063405_020 Hb_015690_010 Hb_015690_010 Hb_002188_140--Hb_015690_010 Hb_000175_020 Hb_000175_020 Hb_002188_140--Hb_000175_020 Hb_062671_010 Hb_062671_010 Hb_002188_140--Hb_062671_010 Hb_000828_050 Hb_000828_050 Hb_002188_140--Hb_000828_050 Hb_000230_030 Hb_000230_030 Hb_002188_140--Hb_000230_030 Hb_002360_030 Hb_002360_030 Hb_063405_020--Hb_002360_030 Hb_011310_080 Hb_011310_080 Hb_063405_020--Hb_011310_080 Hb_000001_130 Hb_000001_130 Hb_063405_020--Hb_000001_130 Hb_001114_040 Hb_001114_040 Hb_063405_020--Hb_001114_040 Hb_007054_050 Hb_007054_050 Hb_063405_020--Hb_007054_050 Hb_001486_030 Hb_001486_030 Hb_015690_010--Hb_001486_030 Hb_108329_020 Hb_108329_020 Hb_015690_010--Hb_108329_020 Hb_043485_010 Hb_043485_010 Hb_015690_010--Hb_043485_010 Hb_083820_010 Hb_083820_010 Hb_015690_010--Hb_083820_010 Hb_000227_070 Hb_000227_070 Hb_015690_010--Hb_000227_070 Hb_001246_030 Hb_001246_030 Hb_015690_010--Hb_001246_030 Hb_000213_090 Hb_000213_090 Hb_000175_020--Hb_000213_090 Hb_000061_090 Hb_000061_090 Hb_000175_020--Hb_000061_090 Hb_074506_010 Hb_074506_010 Hb_000175_020--Hb_074506_010 Hb_004657_060 Hb_004657_060 Hb_000175_020--Hb_004657_060 Hb_007044_100 Hb_007044_100 Hb_000175_020--Hb_007044_100 Hb_060658_010 Hb_060658_010 Hb_062671_010--Hb_060658_010 Hb_131872_010 Hb_131872_010 Hb_062671_010--Hb_131872_010 Hb_006452_240 Hb_006452_240 Hb_062671_010--Hb_006452_240 Hb_027760_090 Hb_027760_090 Hb_062671_010--Hb_027760_090 Hb_000300_310 Hb_000300_310 Hb_062671_010--Hb_000300_310 Hb_012760_110 Hb_012760_110 Hb_062671_010--Hb_012760_110 Hb_004136_030 Hb_004136_030 Hb_000828_050--Hb_004136_030 Hb_000172_190 Hb_000172_190 Hb_000828_050--Hb_000172_190 Hb_000252_110 Hb_000252_110 Hb_000828_050--Hb_000252_110 Hb_007199_010 Hb_007199_010 Hb_000828_050--Hb_007199_010 Hb_001621_010 Hb_001621_010 Hb_000828_050--Hb_001621_010 Hb_000828_050--Hb_015690_010 Hb_000635_260 Hb_000635_260 Hb_000230_030--Hb_000635_260 Hb_003057_010 Hb_003057_010 Hb_000230_030--Hb_003057_010 Hb_000574_460 Hb_000574_460 Hb_000230_030--Hb_000574_460 Hb_002131_030 Hb_002131_030 Hb_000230_030--Hb_002131_030 Hb_003124_020 Hb_003124_020 Hb_000230_030--Hb_003124_020 Hb_132998_010 Hb_132998_010 Hb_000230_030--Hb_132998_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.308551 0.0357617 0 0 0.118008
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.307502 0.402774 0.140677 0.62805 0.466918

CAGE analysis