Hb_000574_460

Information

Type -
Description -
Location Contig574: 403113-403756
Sequence    

Annotation

kegg
ID tcc:TCM_027260
description Uncharacterized protein isoform 1
nr
ID KDP37063.1
description hypothetical protein JCGZ_06119 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KPX2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06119 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000574_460 0.0 - - hypothetical protein JCGZ_06119 [Jatropha curcas]
2 Hb_001493_120 0.1418113944 - - -
3 Hb_073490_020 0.1866758076 - - hypothetical protein PRUPE_ppa016333mg, partial [Prunus persica]
4 Hb_001490_030 0.1916330025 - - PREDICTED: psbP domain-containing protein 6, chloroplastic [Jatropha curcas]
5 Hb_091194_010 0.1925152241 - - hypothetical protein POPTR_0006s05430g [Populus trichocarpa]
6 Hb_006738_020 0.1962421502 - - hypothetical protein VITISV_010510 [Vitis vinifera]
7 Hb_000429_090 0.2004951773 - - PREDICTED: carboxyl-terminal-processing peptidase 3, chloroplastic [Jatropha curcas]
8 Hb_003849_270 0.2007211346 - - -
9 Hb_000429_100 0.2012282537 - - hypothetical protein POPTR_0006s05430g [Populus trichocarpa]
10 Hb_000622_240 0.2022562865 - - PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Jatropha curcas]
11 Hb_001136_060 0.2058285774 - - PREDICTED: uncharacterized protein LOC105641994 [Jatropha curcas]
12 Hb_000230_030 0.2074630424 - - hypothetical protein B456_013G2021001, partial [Gossypium raimondii]
13 Hb_003349_030 0.2157966086 - - PREDICTED: uncharacterized protein LOC105628283 [Jatropha curcas]
14 Hb_004125_040 0.2168078752 - - -
15 Hb_000010_260 0.2182746355 - - PREDICTED: uncharacterized protein LOC105640273 [Jatropha curcas]
16 Hb_001491_010 0.222052264 - - PREDICTED: uncharacterized protein LOC105649805 [Jatropha curcas]
17 Hb_001790_030 0.2232983596 - - PREDICTED: ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Jatropha curcas]
18 Hb_000056_070 0.2243195207 - - -
19 Hb_003050_280 0.2258109492 transcription factor TF Family: HMG DNA-binding protein MNB1B, putative [Ricinus communis]
20 Hb_001823_060 0.2269465031 - - fructose-bisphosphate aldolase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000574_460 Hb_000574_460 Hb_001493_120 Hb_001493_120 Hb_000574_460--Hb_001493_120 Hb_073490_020 Hb_073490_020 Hb_000574_460--Hb_073490_020 Hb_001490_030 Hb_001490_030 Hb_000574_460--Hb_001490_030 Hb_091194_010 Hb_091194_010 Hb_000574_460--Hb_091194_010 Hb_006738_020 Hb_006738_020 Hb_000574_460--Hb_006738_020 Hb_000429_090 Hb_000429_090 Hb_000574_460--Hb_000429_090 Hb_001493_120--Hb_000429_090 Hb_002809_150 Hb_002809_150 Hb_001493_120--Hb_002809_150 Hb_001493_120--Hb_091194_010 Hb_001136_060 Hb_001136_060 Hb_001493_120--Hb_001136_060 Hb_001284_010 Hb_001284_010 Hb_001493_120--Hb_001284_010 Hb_003849_270 Hb_003849_270 Hb_073490_020--Hb_003849_270 Hb_001823_060 Hb_001823_060 Hb_073490_020--Hb_001823_060 Hb_000723_340 Hb_000723_340 Hb_073490_020--Hb_000723_340 Hb_001252_220 Hb_001252_220 Hb_073490_020--Hb_001252_220 Hb_000056_070 Hb_000056_070 Hb_073490_020--Hb_000056_070 Hb_003813_020 Hb_003813_020 Hb_001490_030--Hb_003813_020 Hb_000622_240 Hb_000622_240 Hb_001490_030--Hb_000622_240 Hb_001712_020 Hb_001712_020 Hb_001490_030--Hb_001712_020 Hb_000107_570 Hb_000107_570 Hb_001490_030--Hb_000107_570 Hb_004241_020 Hb_004241_020 Hb_001490_030--Hb_004241_020 Hb_000156_210 Hb_000156_210 Hb_001490_030--Hb_000156_210 Hb_091194_010--Hb_000429_090 Hb_000429_100 Hb_000429_100 Hb_091194_010--Hb_000429_100 Hb_000169_140 Hb_000169_140 Hb_091194_010--Hb_000169_140 Hb_091194_010--Hb_001136_060 Hb_091194_010--Hb_002809_150 Hb_000705_290 Hb_000705_290 Hb_091194_010--Hb_000705_290 Hb_002872_050 Hb_002872_050 Hb_006738_020--Hb_002872_050 Hb_006738_020--Hb_000056_070 Hb_000072_200 Hb_000072_200 Hb_006738_020--Hb_000072_200 Hb_003050_280 Hb_003050_280 Hb_006738_020--Hb_003050_280 Hb_000457_290 Hb_000457_290 Hb_006738_020--Hb_000457_290 Hb_000208_180 Hb_000208_180 Hb_006738_020--Hb_000208_180 Hb_000429_090--Hb_002809_150 Hb_000530_120 Hb_000530_120 Hb_000429_090--Hb_000530_120 Hb_000429_090--Hb_003849_270 Hb_000429_090--Hb_001136_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.172182 0.0652748 3.44684 1.66723 0.899408 3.598
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.4486 10.5716 2.72143 2.94766 9.97788

CAGE analysis