Hb_001823_060

Information

Type -
Description -
Location Contig1823: 53766-61755
Sequence    

Annotation

kegg
ID rcu:RCOM_1180710
description fructose-bisphosphate aldolase, putative (EC:4.1.2.13)
nr
ID XP_002533605.1
description fructose-bisphosphate aldolase, putative [Ricinus communis]
swissprot
ID P17784
description Fructose-bisphosphate aldolase cytoplasmic isozyme OS=Oryza sativa subsp. japonica GN=FBA PE=1 SV=2
trembl
ID B9T5T6
description Fructose-bisphosphate aldolase OS=Ricinus communis GN=RCOM_1180710 PE=3 SV=1
Gene Ontology
ID GO:0004332
description fructose-bisphosphate aldolase cytoplasmic isozyme

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17768: 59169-61731
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001823_060 0.0 - - fructose-bisphosphate aldolase, putative [Ricinus communis]
2 Hb_000056_070 0.1511167609 - - -
3 Hb_003349_030 0.1570981834 - - PREDICTED: uncharacterized protein LOC105628283 [Jatropha curcas]
4 Hb_019762_050 0.1590826511 transcription factor TF Family: CSD PREDICTED: glycine-rich protein 2-like [Jatropha curcas]
5 Hb_000005_300 0.1652219366 - - conserved hypothetical protein [Ricinus communis]
6 Hb_017845_010 0.1667262558 - - -
7 Hb_001252_220 0.1704264167 - - PREDICTED: uncharacterized protein LOC105640647 [Jatropha curcas]
8 Hb_000445_490 0.1718984986 - - -
9 Hb_000530_120 0.1720672542 - - copper transport protein ATOX1 [Hevea brasiliensis]
10 Hb_000877_080 0.1754449236 - - PREDICTED: uncharacterized protein LOC105640901 [Jatropha curcas]
11 Hb_000270_610 0.1754717721 - - PREDICTED: uncharacterized protein At5g50100, mitochondrial [Jatropha curcas]
12 Hb_073490_020 0.1813220755 - - hypothetical protein PRUPE_ppa016333mg, partial [Prunus persica]
13 Hb_007894_050 0.1831785642 - - PREDICTED: reactive Intermediate Deaminase A, chloroplastic [Jatropha curcas]
14 Hb_000116_360 0.1852372507 - - PREDICTED: uncharacterized protein LOC105116418 [Populus euphratica]
15 Hb_002872_050 0.1858840999 - - PREDICTED: thioredoxin-like 3-2, chloroplastic [Jatropha curcas]
16 Hb_003849_270 0.1865448265 - - -
17 Hb_003050_280 0.1887876754 transcription factor TF Family: HMG DNA-binding protein MNB1B, putative [Ricinus communis]
18 Hb_000111_100 0.1893308756 - - PREDICTED: NADPH:quinone oxidoreductase-like [Camelina sativa]
19 Hb_000723_340 0.1902465784 - - PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Jatropha curcas]
20 Hb_000975_230 0.1902796483 - - hypothetical protein ZEAMMB73_864543 [Zea mays]

Gene co-expression network

sample Hb_001823_060 Hb_001823_060 Hb_000056_070 Hb_000056_070 Hb_001823_060--Hb_000056_070 Hb_003349_030 Hb_003349_030 Hb_001823_060--Hb_003349_030 Hb_019762_050 Hb_019762_050 Hb_001823_060--Hb_019762_050 Hb_000005_300 Hb_000005_300 Hb_001823_060--Hb_000005_300 Hb_017845_010 Hb_017845_010 Hb_001823_060--Hb_017845_010 Hb_001252_220 Hb_001252_220 Hb_001823_060--Hb_001252_220 Hb_002872_050 Hb_002872_050 Hb_000056_070--Hb_002872_050 Hb_001019_150 Hb_001019_150 Hb_000056_070--Hb_001019_150 Hb_003880_030 Hb_003880_030 Hb_000056_070--Hb_003880_030 Hb_003106_100 Hb_003106_100 Hb_000056_070--Hb_003106_100 Hb_001329_150 Hb_001329_150 Hb_000056_070--Hb_001329_150 Hb_003050_280 Hb_003050_280 Hb_000056_070--Hb_003050_280 Hb_000877_080 Hb_000877_080 Hb_003349_030--Hb_000877_080 Hb_001790_030 Hb_001790_030 Hb_003349_030--Hb_001790_030 Hb_003349_030--Hb_000056_070 Hb_003050_250 Hb_003050_250 Hb_003349_030--Hb_003050_250 Hb_001712_020 Hb_001712_020 Hb_003349_030--Hb_001712_020 Hb_003349_030--Hb_001019_150 Hb_027298_010 Hb_027298_010 Hb_019762_050--Hb_027298_010 Hb_000457_290 Hb_000457_290 Hb_019762_050--Hb_000457_290 Hb_000403_070 Hb_000403_070 Hb_019762_050--Hb_000403_070 Hb_000032_370 Hb_000032_370 Hb_019762_050--Hb_000032_370 Hb_140627_010 Hb_140627_010 Hb_019762_050--Hb_140627_010 Hb_001575_060 Hb_001575_060 Hb_019762_050--Hb_001575_060 Hb_001373_060 Hb_001373_060 Hb_000005_300--Hb_001373_060 Hb_012022_140 Hb_012022_140 Hb_000005_300--Hb_012022_140 Hb_000005_300--Hb_001252_220 Hb_001979_020 Hb_001979_020 Hb_000005_300--Hb_001979_020 Hb_000215_330 Hb_000215_330 Hb_000005_300--Hb_000215_330 Hb_000739_140 Hb_000739_140 Hb_000005_300--Hb_000739_140 Hb_000116_360 Hb_000116_360 Hb_017845_010--Hb_000116_360 Hb_002613_010 Hb_002613_010 Hb_017845_010--Hb_002613_010 Hb_000723_340 Hb_000723_340 Hb_017845_010--Hb_000723_340 Hb_007894_050 Hb_007894_050 Hb_017845_010--Hb_007894_050 Hb_017845_010--Hb_000056_070 Hb_002260_010 Hb_002260_010 Hb_001252_220--Hb_002260_010 Hb_001252_220--Hb_012022_140 Hb_004057_010 Hb_004057_010 Hb_001252_220--Hb_004057_010 Hb_024074_010 Hb_024074_010 Hb_001252_220--Hb_024074_010 Hb_003020_150 Hb_003020_150 Hb_001252_220--Hb_003020_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.362554 0.250514 2.17528 2.04708 0.74594 0.181604
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.30956 6.4213 1.69626 0.744518 3.57171

CAGE analysis