Hb_000635_260

Information

Type -
Description -
Location Contig635: 238063-244412
Sequence    

Annotation

kegg
ID vvi:100257875
description uncharacterized LOC100257875
nr
ID XP_012066463.1
description PREDICTED: uncharacterized protein LOC105629473 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L6B0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23658 PE=4 SV=1
Gene Ontology
ID GO:0003700
description dna binding

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000635_260 0.0 - - PREDICTED: uncharacterized protein LOC105629473 [Jatropha curcas]
2 Hb_048573_010 0.1479036472 - - choline monooxygenase, putative [Ricinus communis]
3 Hb_000230_030 0.1793052308 - - hypothetical protein B456_013G2021001, partial [Gossypium raimondii]
4 Hb_000159_130 0.1822880483 - - RNA binding protein, putative [Ricinus communis]
5 Hb_002131_030 0.1888580434 - - PREDICTED: pyruvate kinase isozyme G, chloroplastic [Jatropha curcas]
6 Hb_011282_020 0.190847231 transcription factor TF Family: MYB-related conserved hypothetical protein [Ricinus communis]
7 Hb_099136_010 0.1984010384 - - PREDICTED: cysteine synthase-like isoform X3 [Cucumis sativus]
8 Hb_000035_270 0.2004363393 - - PREDICTED: uncharacterized protein LOC105637542 [Jatropha curcas]
9 Hb_055619_010 0.2027199718 - - PREDICTED: uncharacterized protein LOC105632456 isoform X2 [Jatropha curcas]
10 Hb_002193_030 0.2072582292 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH130-like [Jatropha curcas]
11 Hb_025194_100 0.2108858428 - - PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase [Jatropha curcas]
12 Hb_002811_010 0.2125388927 - - cysteine synthase, putative [Ricinus communis]
13 Hb_002994_030 0.2130275714 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-like [Pyrus x bretschneideri]
14 Hb_035273_020 0.2135839093 - - PREDICTED: amidase 1-like isoform X1 [Jatropha curcas]
15 Hb_003057_010 0.2146896731 - - hypothetical protein JCGZ_06666 [Jatropha curcas]
16 Hb_012627_040 0.2148672489 - - PREDICTED: uncharacterized protein LOC105641988 [Jatropha curcas]
17 Hb_003938_120 0.2152361985 - - autophagy 9 family protein, partial [Populus trichocarpa]
18 Hb_000510_240 0.2154473825 desease resistance Gene Name: PRK ATP binding protein, putative [Ricinus communis]
19 Hb_069150_010 0.2155714596 desease resistance Gene Name: NB-ARC Disease resistance protein RPM1, putative [Ricinus communis]
20 Hb_000465_190 0.2156394402 - - PREDICTED: E3 ubiquitin-protein ligase HOS1 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000635_260 Hb_000635_260 Hb_048573_010 Hb_048573_010 Hb_000635_260--Hb_048573_010 Hb_000230_030 Hb_000230_030 Hb_000635_260--Hb_000230_030 Hb_000159_130 Hb_000159_130 Hb_000635_260--Hb_000159_130 Hb_002131_030 Hb_002131_030 Hb_000635_260--Hb_002131_030 Hb_011282_020 Hb_011282_020 Hb_000635_260--Hb_011282_020 Hb_099136_010 Hb_099136_010 Hb_000635_260--Hb_099136_010 Hb_002193_030 Hb_002193_030 Hb_048573_010--Hb_002193_030 Hb_012633_040 Hb_012633_040 Hb_048573_010--Hb_012633_040 Hb_001123_040 Hb_001123_040 Hb_048573_010--Hb_001123_040 Hb_000327_180 Hb_000327_180 Hb_048573_010--Hb_000327_180 Hb_004157_050 Hb_004157_050 Hb_048573_010--Hb_004157_050 Hb_003057_010 Hb_003057_010 Hb_000230_030--Hb_003057_010 Hb_000574_460 Hb_000574_460 Hb_000230_030--Hb_000574_460 Hb_000230_030--Hb_002131_030 Hb_003124_020 Hb_003124_020 Hb_000230_030--Hb_003124_020 Hb_132998_010 Hb_132998_010 Hb_000230_030--Hb_132998_010 Hb_001006_020 Hb_001006_020 Hb_000159_130--Hb_001006_020 Hb_001728_060 Hb_001728_060 Hb_000159_130--Hb_001728_060 Hb_000289_110 Hb_000289_110 Hb_000159_130--Hb_000289_110 Hb_027459_020 Hb_027459_020 Hb_000159_130--Hb_027459_020 Hb_000107_150 Hb_000107_150 Hb_000159_130--Hb_000107_150 Hb_003020_260 Hb_003020_260 Hb_000159_130--Hb_003020_260 Hb_000197_220 Hb_000197_220 Hb_002131_030--Hb_000197_220 Hb_000203_140 Hb_000203_140 Hb_002131_030--Hb_000203_140 Hb_100886_010 Hb_100886_010 Hb_002131_030--Hb_100886_010 Hb_002338_050 Hb_002338_050 Hb_002131_030--Hb_002338_050 Hb_001221_340 Hb_001221_340 Hb_002131_030--Hb_001221_340 Hb_000510_240 Hb_000510_240 Hb_002131_030--Hb_000510_240 Hb_001660_100 Hb_001660_100 Hb_011282_020--Hb_001660_100 Hb_000329_800 Hb_000329_800 Hb_011282_020--Hb_000329_800 Hb_121729_010 Hb_121729_010 Hb_011282_020--Hb_121729_010 Hb_000260_630 Hb_000260_630 Hb_011282_020--Hb_000260_630 Hb_111036_010 Hb_111036_010 Hb_011282_020--Hb_111036_010 Hb_002439_010 Hb_002439_010 Hb_011282_020--Hb_002439_010 Hb_099136_010--Hb_000159_130 Hb_008103_050 Hb_008103_050 Hb_099136_010--Hb_008103_050 Hb_055619_010 Hb_055619_010 Hb_099136_010--Hb_055619_010 Hb_001799_200 Hb_001799_200 Hb_099136_010--Hb_001799_200 Hb_001242_140 Hb_001242_140 Hb_099136_010--Hb_001242_140 Hb_007534_050 Hb_007534_050 Hb_099136_010--Hb_007534_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0594711 0.146806 0.0613856 0.0645008 0.170569
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.221971 0.174519 0.104531 0.21245 0.231867

CAGE analysis