Hb_001901_030

Information

Type -
Description -
Location Contig1901: 19510-26198
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001901_030 0.0 - - -
2 Hb_007802_020 0.3144112041 - - PREDICTED: receptor-like protein 12 [Eucalyptus grandis]
3 Hb_001335_050 0.3220373211 - - -
4 Hb_005539_270 0.3227051356 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
5 Hb_002498_150 0.327003911 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001629_010 0.3357944669 - - Disease resistance protein RPM1, putative [Theobroma cacao]
7 Hb_002450_170 0.3412391386 transcription factor TF Family: FAR1 Protein FAR1-RELATED SEQUENCE 5 [Glycine soja]
8 Hb_005714_030 0.3442205568 - - PREDICTED: COBRA-like protein 6 isoform X1 [Gossypium raimondii]
9 Hb_022793_010 0.3452315088 - - PREDICTED: uncharacterized protein LOC104221396 [Nicotiana sylvestris]
10 Hb_171693_010 0.3502209038 - - hypothetical protein JCGZ_26531 [Jatropha curcas]
11 Hb_000815_150 0.3504421466 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
12 Hb_095449_010 0.3513441084 - - PREDICTED: low-temperature-induced 65 kDa protein-like [Jatropha curcas]
13 Hb_001825_020 0.3523083298 - - nucleic acid binding protein, putative [Ricinus communis]
14 Hb_007064_030 0.3562929642 - - polyprotein [Citrus endogenous pararetrovirus]
15 Hb_007105_010 0.3618163032 - - PREDICTED: uncharacterized protein LOC103455579 [Malus domestica]
16 Hb_000126_040 0.3629952174 - - kinase, putative [Ricinus communis]
17 Hb_058722_010 0.3664426735 - - -
18 Hb_000574_090 0.3672348704 - - PREDICTED: uncharacterized protein LOC104878039 [Vitis vinifera]
19 Hb_006907_120 0.3698735864 - - PREDICTED: uncharacterized protein LOC103327233 [Prunus mume]
20 Hb_001230_020 0.3710291951 - - hypothetical protein POPTR_0001s31610g [Populus trichocarpa]

Gene co-expression network

sample Hb_001901_030 Hb_001901_030 Hb_007802_020 Hb_007802_020 Hb_001901_030--Hb_007802_020 Hb_001335_050 Hb_001335_050 Hb_001901_030--Hb_001335_050 Hb_005539_270 Hb_005539_270 Hb_001901_030--Hb_005539_270 Hb_002498_150 Hb_002498_150 Hb_001901_030--Hb_002498_150 Hb_001629_010 Hb_001629_010 Hb_001901_030--Hb_001629_010 Hb_002450_170 Hb_002450_170 Hb_001901_030--Hb_002450_170 Hb_116349_040 Hb_116349_040 Hb_007802_020--Hb_116349_040 Hb_007042_010 Hb_007042_010 Hb_007802_020--Hb_007042_010 Hb_005779_040 Hb_005779_040 Hb_007802_020--Hb_005779_040 Hb_006453_010 Hb_006453_010 Hb_007802_020--Hb_006453_010 Hb_012098_170 Hb_012098_170 Hb_007802_020--Hb_012098_170 Hb_001825_020 Hb_001825_020 Hb_007802_020--Hb_001825_020 Hb_107221_010 Hb_107221_010 Hb_001335_050--Hb_107221_010 Hb_005654_010 Hb_005654_010 Hb_001335_050--Hb_005654_010 Hb_071130_040 Hb_071130_040 Hb_001335_050--Hb_071130_040 Hb_057207_010 Hb_057207_010 Hb_001335_050--Hb_057207_010 Hb_000375_180 Hb_000375_180 Hb_001335_050--Hb_000375_180 Hb_007064_030 Hb_007064_030 Hb_001335_050--Hb_007064_030 Hb_005155_040 Hb_005155_040 Hb_005539_270--Hb_005155_040 Hb_007218_160 Hb_007218_160 Hb_005539_270--Hb_007218_160 Hb_006829_010 Hb_006829_010 Hb_005539_270--Hb_006829_010 Hb_004586_400 Hb_004586_400 Hb_005539_270--Hb_004586_400 Hb_001086_010 Hb_001086_010 Hb_005539_270--Hb_001086_010 Hb_005539_270--Hb_005779_040 Hb_027337_050 Hb_027337_050 Hb_002498_150--Hb_027337_050 Hb_130579_050 Hb_130579_050 Hb_002498_150--Hb_130579_050 Hb_002025_240 Hb_002025_240 Hb_002498_150--Hb_002025_240 Hb_004191_030 Hb_004191_030 Hb_002498_150--Hb_004191_030 Hb_001899_040 Hb_001899_040 Hb_002498_150--Hb_001899_040 Hb_002571_050 Hb_002571_050 Hb_002498_150--Hb_002571_050 Hb_008890_030 Hb_008890_030 Hb_001629_010--Hb_008890_030 Hb_002552_020 Hb_002552_020 Hb_001629_010--Hb_002552_020 Hb_171900_030 Hb_171900_030 Hb_001629_010--Hb_171900_030 Hb_002010_050 Hb_002010_050 Hb_001629_010--Hb_002010_050 Hb_000340_250 Hb_000340_250 Hb_001629_010--Hb_000340_250 Hb_007044_100 Hb_007044_100 Hb_001629_010--Hb_007044_100 Hb_007054_050 Hb_007054_050 Hb_002450_170--Hb_007054_050 Hb_131872_010 Hb_131872_010 Hb_002450_170--Hb_131872_010 Hb_001114_040 Hb_001114_040 Hb_002450_170--Hb_001114_040 Hb_011986_010 Hb_011986_010 Hb_002450_170--Hb_011986_010 Hb_007317_130 Hb_007317_130 Hb_002450_170--Hb_007317_130 Hb_063405_020 Hb_063405_020 Hb_002450_170--Hb_063405_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.174565 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0544027 0.0427852 0 0.0344611 0.0871585

CAGE analysis