Hb_006829_010

Information

Type -
Description -
Location Contig6829: 5615-8632
Sequence    

Annotation

kegg
ID rcu:RCOM_0586540
description receptor protein kinase, putative (EC:2.7.11.25 1.3.1.74)
nr
ID XP_002522985.1
description receptor protein kinase, putative [Ricinus communis]
swissprot
ID Q8VZG8
description Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=2 SV=3
trembl
ID B9SAG6
description Receptor protein kinase, putative OS=Ricinus communis GN=RCOM_0586540 PE=4 SV=1
Gene Ontology
ID GO:0016301
description probable lrr receptor-like serine threonine-protein kinase at4g08850

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006829_010 0.0 - - receptor protein kinase, putative [Ricinus communis]
2 Hb_032823_010 0.2265533173 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002821_020 0.2313558558 desease resistance Gene Name: ABC_tran PREDICTED: ABC transporter C family member 4 [Vitis vinifera]
4 Hb_005539_270 0.261722464 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
5 Hb_004586_400 0.2646555446 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
6 Hb_000163_300 0.2663273634 - - multidrug resistance-associated protein 2, 6 (mrp2, 6), abc-transoprter, putative [Ricinus communis]
7 Hb_005155_040 0.2722574041 - - PREDICTED: uncharacterized protein LOC105436302 [Cucumis sativus]
8 Hb_000149_070 0.2801431641 - - PREDICTED: uncharacterized protein At5g39570 isoform X1 [Jatropha curcas]
9 Hb_183209_010 0.2808088163 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X1 [Jatropha curcas]
10 Hb_014175_010 0.28467465 - - Uncharacterized protein TCM_033221 [Theobroma cacao]
11 Hb_002173_060 0.2868548011 - - hypothetical protein JCGZ_12464 [Jatropha curcas]
12 Hb_005779_040 0.2870885227 - - -
13 Hb_006198_140 0.2887116852 - - hypothetical protein L484_015208 [Morus notabilis]
14 Hb_001329_040 0.2898840448 - - hypothetical protein RCOM_1345340 [Ricinus communis]
15 Hb_000963_200 0.2912538106 - - beta-galactosidase, putative [Ricinus communis]
16 Hb_000165_210 0.2945250769 - - PREDICTED: trihelix transcription factor ASIL2 isoform X2 [Jatropha curcas]
17 Hb_006573_300 0.2966855106 - - ATP binding protein, putative [Ricinus communis]
18 Hb_001148_030 0.3010694339 - - -
19 Hb_000300_590 0.3018723666 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Jatropha curcas]
20 Hb_000034_030 0.3033597747 - - protein phosphatase 2c, putative [Ricinus communis]

Gene co-expression network

sample Hb_006829_010 Hb_006829_010 Hb_032823_010 Hb_032823_010 Hb_006829_010--Hb_032823_010 Hb_002821_020 Hb_002821_020 Hb_006829_010--Hb_002821_020 Hb_005539_270 Hb_005539_270 Hb_006829_010--Hb_005539_270 Hb_004586_400 Hb_004586_400 Hb_006829_010--Hb_004586_400 Hb_000163_300 Hb_000163_300 Hb_006829_010--Hb_000163_300 Hb_005155_040 Hb_005155_040 Hb_006829_010--Hb_005155_040 Hb_002173_060 Hb_002173_060 Hb_032823_010--Hb_002173_060 Hb_032823_010--Hb_004586_400 Hb_000029_370 Hb_000029_370 Hb_032823_010--Hb_000029_370 Hb_000638_090 Hb_000638_090 Hb_032823_010--Hb_000638_090 Hb_010326_030 Hb_010326_030 Hb_032823_010--Hb_010326_030 Hb_001408_050 Hb_001408_050 Hb_032823_010--Hb_001408_050 Hb_002821_020--Hb_000163_300 Hb_000390_260 Hb_000390_260 Hb_002821_020--Hb_000390_260 Hb_012098_170 Hb_012098_170 Hb_002821_020--Hb_012098_170 Hb_000213_090 Hb_000213_090 Hb_002821_020--Hb_000213_090 Hb_017987_040 Hb_017987_040 Hb_002821_020--Hb_017987_040 Hb_005539_270--Hb_005155_040 Hb_007218_160 Hb_007218_160 Hb_005539_270--Hb_007218_160 Hb_005539_270--Hb_004586_400 Hb_001086_010 Hb_001086_010 Hb_005539_270--Hb_001086_010 Hb_005779_040 Hb_005779_040 Hb_005539_270--Hb_005779_040 Hb_004586_400--Hb_002173_060 Hb_001515_050 Hb_001515_050 Hb_004586_400--Hb_001515_050 Hb_005183_200 Hb_005183_200 Hb_004586_400--Hb_005183_200 Hb_000720_210 Hb_000720_210 Hb_004586_400--Hb_000720_210 Hb_043768_010 Hb_043768_010 Hb_004586_400--Hb_043768_010 Hb_000163_300--Hb_017987_040 Hb_002555_020 Hb_002555_020 Hb_000163_300--Hb_002555_020 Hb_006198_150 Hb_006198_150 Hb_000163_300--Hb_006198_150 Hb_004195_190 Hb_004195_190 Hb_000163_300--Hb_004195_190 Hb_000679_240 Hb_000679_240 Hb_000163_300--Hb_000679_240 Hb_005155_040--Hb_001086_010 Hb_005155_040--Hb_004586_400 Hb_002122_050 Hb_002122_050 Hb_005155_040--Hb_002122_050 Hb_000574_250 Hb_000574_250 Hb_005155_040--Hb_000574_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0953579 0 0.0457326 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.07212 0.0113506 0 0.175571 0.02422

CAGE analysis