Hb_032823_010

Information

Type -
Description -
Location Contig32823: 9693-10643
Sequence    

Annotation

kegg
ID rcu:RCOM_0138270
description hypothetical protein
nr
ID XP_002526155.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SJI6
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0138270 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_032823_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_002173_060 0.1793165507 - - hypothetical protein JCGZ_12464 [Jatropha curcas]
3 Hb_004586_400 0.192627905 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
4 Hb_000029_370 0.1950139836 - - multidrug resistance pump, putative [Ricinus communis]
5 Hb_000638_090 0.2000597362 - - ABC transporter family protein [Hevea brasiliensis]
6 Hb_010326_030 0.2046789214 - - PREDICTED: abscisic acid 8'-hydroxylase 4-like [Jatropha curcas]
7 Hb_001408_050 0.2074760193 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000963_200 0.2159375926 - - beta-galactosidase, putative [Ricinus communis]
9 Hb_000317_220 0.2188802115 - - conserved hypothetical protein [Ricinus communis]
10 Hb_005237_040 0.2211703048 - - PREDICTED: uncharacterized protein LOC105630923 [Jatropha curcas]
11 Hb_000317_230 0.2211939712 - - PREDICTED: equilibrative nucleotide transporter 3-like [Jatropha curcas]
12 Hb_000077_330 0.2230970125 - - PREDICTED: bifunctional epoxide hydrolase 2-like [Jatropha curcas]
13 Hb_000034_030 0.2237890525 - - protein phosphatase 2c, putative [Ricinus communis]
14 Hb_003453_030 0.2251130725 - - hypothetical protein JCGZ_26893 [Jatropha curcas]
15 Hb_001329_040 0.2262497259 - - hypothetical protein RCOM_1345340 [Ricinus communis]
16 Hb_001678_030 0.2264526008 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like [Jatropha curcas]
17 Hb_006829_010 0.2265533173 - - receptor protein kinase, putative [Ricinus communis]
18 Hb_012807_060 0.2268769955 - - ABC transporter family protein [Hevea brasiliensis]
19 Hb_014037_010 0.2270953506 - - PREDICTED: uncharacterized protein LOC105641871 [Jatropha curcas]
20 Hb_009581_050 0.2287606436 - - hypothetical protein CISIN_1g0025812mg, partial [Citrus sinensis]

Gene co-expression network

sample Hb_032823_010 Hb_032823_010 Hb_002173_060 Hb_002173_060 Hb_032823_010--Hb_002173_060 Hb_004586_400 Hb_004586_400 Hb_032823_010--Hb_004586_400 Hb_000029_370 Hb_000029_370 Hb_032823_010--Hb_000029_370 Hb_000638_090 Hb_000638_090 Hb_032823_010--Hb_000638_090 Hb_010326_030 Hb_010326_030 Hb_032823_010--Hb_010326_030 Hb_001408_050 Hb_001408_050 Hb_032823_010--Hb_001408_050 Hb_000844_100 Hb_000844_100 Hb_002173_060--Hb_000844_100 Hb_182021_010 Hb_182021_010 Hb_002173_060--Hb_182021_010 Hb_008140_060 Hb_008140_060 Hb_002173_060--Hb_008140_060 Hb_000589_180 Hb_000589_180 Hb_002173_060--Hb_000589_180 Hb_009581_050 Hb_009581_050 Hb_002173_060--Hb_009581_050 Hb_094637_010 Hb_094637_010 Hb_002173_060--Hb_094637_010 Hb_004586_400--Hb_002173_060 Hb_001515_050 Hb_001515_050 Hb_004586_400--Hb_001515_050 Hb_005183_200 Hb_005183_200 Hb_004586_400--Hb_005183_200 Hb_000720_210 Hb_000720_210 Hb_004586_400--Hb_000720_210 Hb_043768_010 Hb_043768_010 Hb_004586_400--Hb_043768_010 Hb_005237_040 Hb_005237_040 Hb_000029_370--Hb_005237_040 Hb_001678_030 Hb_001678_030 Hb_000029_370--Hb_001678_030 Hb_014037_010 Hb_014037_010 Hb_000029_370--Hb_014037_010 Hb_000236_050 Hb_000236_050 Hb_000029_370--Hb_000236_050 Hb_002150_010 Hb_002150_010 Hb_000029_370--Hb_002150_010 Hb_001221_480 Hb_001221_480 Hb_000029_370--Hb_001221_480 Hb_009823_010 Hb_009823_010 Hb_000638_090--Hb_009823_010 Hb_000638_090--Hb_001408_050 Hb_001248_030 Hb_001248_030 Hb_000638_090--Hb_001248_030 Hb_003576_050 Hb_003576_050 Hb_000638_090--Hb_003576_050 Hb_004218_160 Hb_004218_160 Hb_000638_090--Hb_004218_160 Hb_117168_010 Hb_117168_010 Hb_000638_090--Hb_117168_010 Hb_010326_030--Hb_094637_010 Hb_010326_030--Hb_001678_030 Hb_000487_140 Hb_000487_140 Hb_010326_030--Hb_000487_140 Hb_001158_080 Hb_001158_080 Hb_010326_030--Hb_001158_080 Hb_000934_290 Hb_000934_290 Hb_010326_030--Hb_000934_290 Hb_001638_110 Hb_001638_110 Hb_010326_030--Hb_001638_110 Hb_003453_030 Hb_003453_030 Hb_001408_050--Hb_003453_030 Hb_001408_050--Hb_009823_010 Hb_000181_160 Hb_000181_160 Hb_001408_050--Hb_000181_160 Hb_001408_050--Hb_001678_030 Hb_001408_050--Hb_003576_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.40038 0.04991 0.23397 0 0.0403734
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.147981 0 0 0.731772 0.115934

CAGE analysis