Hb_000720_210

Information

Type -
Description -
Location Contig720: 244126-260986
Sequence    

Annotation

kegg
ID mtr:MTR_7g076660
description (+)-neomenthol dehydrogenase
nr
ID XP_002511824.1
description carbonyl reductase, putative [Ricinus communis]
swissprot
ID Q9ZUH5
description Short-chain dehydrogenase/reductase 2b OS=Arabidopsis thaliana GN=SDR2b PE=2 SV=1
trembl
ID M0SXV0
description Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1
Gene Ontology
ID GO:0016491
description salutaridine reductase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000720_210 0.0 - - carbonyl reductase, putative [Ricinus communis]
2 Hb_107543_010 0.1276299871 - - Cysteine-rich RLK 10, putative [Theobroma cacao]
3 Hb_006316_030 0.1294926194 - - aldehyde oxidase, putative [Ricinus communis]
4 Hb_052764_080 0.1319420888 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD5 isoform X1 [Jatropha curcas]
5 Hb_000120_070 0.1327564827 - - PREDICTED: uncharacterized protein LOC105630351 [Jatropha curcas]
6 Hb_001369_070 0.1336222105 - - unnamed protein product [Vitis vinifera]
7 Hb_074312_020 0.1339036749 - - cytochrome P450, putative [Ricinus communis]
8 Hb_007894_030 0.1371241507 - - calcium-dependent protein kinase, putative [Ricinus communis]
9 Hb_038777_010 0.1372262894 transcription factor TF Family: G2-like PREDICTED: probable transcription factor KAN2 isoform X1 [Populus euphratica]
10 Hb_009581_040 0.1382215583 - - hypothetical protein B456_011G052100 [Gossypium raimondii]
11 Hb_046101_010 0.1401580961 - - PREDICTED: putative serine/threonine-protein kinase-like protein CCR3 [Jatropha curcas]
12 Hb_001862_060 0.1434378871 - - PREDICTED: uncharacterized protein LOC105639802 isoform X1 [Jatropha curcas]
13 Hb_000977_090 0.1446510565 - - hypothetical protein POPTR_0010s18550g [Populus trichocarpa]
14 Hb_008226_120 0.144933961 - - ATP binding protein, putative [Ricinus communis]
15 Hb_004218_160 0.1452222999 - - NBS-LRR type disease resistance protein [Medicago truncatula]
16 Hb_005183_200 0.1468313912 - - EG964 [Manihot glaziovii]
17 Hb_001894_040 0.1481469359 - - PREDICTED: carbonic anhydrase 2 isoform X1 [Jatropha curcas]
18 Hb_001636_010 0.151575404 - - hypothetical protein JCGZ_01264 [Jatropha curcas]
19 Hb_020285_010 0.1516138739 - - PREDICTED: putative serine/threonine-protein kinase-like protein CCR3, partial [Pyrus x bretschneideri]
20 Hb_000280_110 0.1528202579 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]

Gene co-expression network

sample Hb_000720_210 Hb_000720_210 Hb_107543_010 Hb_107543_010 Hb_000720_210--Hb_107543_010 Hb_006316_030 Hb_006316_030 Hb_000720_210--Hb_006316_030 Hb_052764_080 Hb_052764_080 Hb_000720_210--Hb_052764_080 Hb_000120_070 Hb_000120_070 Hb_000720_210--Hb_000120_070 Hb_001369_070 Hb_001369_070 Hb_000720_210--Hb_001369_070 Hb_074312_020 Hb_074312_020 Hb_000720_210--Hb_074312_020 Hb_000280_110 Hb_000280_110 Hb_107543_010--Hb_000280_110 Hb_046101_010 Hb_046101_010 Hb_107543_010--Hb_046101_010 Hb_001894_040 Hb_001894_040 Hb_107543_010--Hb_001894_040 Hb_009803_030 Hb_009803_030 Hb_107543_010--Hb_009803_030 Hb_000489_020 Hb_000489_020 Hb_107543_010--Hb_000489_020 Hb_107543_010--Hb_074312_020 Hb_038777_010 Hb_038777_010 Hb_006316_030--Hb_038777_010 Hb_003106_210 Hb_003106_210 Hb_006316_030--Hb_003106_210 Hb_001862_060 Hb_001862_060 Hb_006316_030--Hb_001862_060 Hb_006316_030--Hb_001894_040 Hb_001636_010 Hb_001636_010 Hb_006316_030--Hb_001636_010 Hb_001085_230 Hb_001085_230 Hb_006316_030--Hb_001085_230 Hb_073171_010 Hb_073171_010 Hb_052764_080--Hb_073171_010 Hb_001259_100 Hb_001259_100 Hb_052764_080--Hb_001259_100 Hb_000977_090 Hb_000977_090 Hb_052764_080--Hb_000977_090 Hb_005183_200 Hb_005183_200 Hb_052764_080--Hb_005183_200 Hb_000429_110 Hb_000429_110 Hb_052764_080--Hb_000429_110 Hb_000836_390 Hb_000836_390 Hb_000120_070--Hb_000836_390 Hb_007765_140 Hb_007765_140 Hb_000120_070--Hb_007765_140 Hb_008215_010 Hb_008215_010 Hb_000120_070--Hb_008215_010 Hb_000075_110 Hb_000075_110 Hb_000120_070--Hb_000075_110 Hb_003556_070 Hb_003556_070 Hb_000120_070--Hb_003556_070 Hb_006970_150 Hb_006970_150 Hb_000120_070--Hb_006970_150 Hb_007894_030 Hb_007894_030 Hb_001369_070--Hb_007894_030 Hb_001369_070--Hb_046101_010 Hb_000497_100 Hb_000497_100 Hb_001369_070--Hb_000497_100 Hb_020285_010 Hb_020285_010 Hb_001369_070--Hb_020285_010 Hb_001369_070--Hb_074312_020 Hb_001369_070--Hb_038777_010 Hb_003439_020 Hb_003439_020 Hb_074312_020--Hb_003439_020 Hb_074312_020--Hb_001862_060 Hb_074312_020--Hb_046101_010 Hb_002276_100 Hb_002276_100 Hb_074312_020--Hb_002276_100 Hb_134017_010 Hb_134017_010 Hb_074312_020--Hb_134017_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.553469 0.131436 0.213188 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.025984 0.0204439 0 0.407205 0.129098

CAGE analysis