Hb_107543_010

Information

Type -
Description -
Location Contig107543: 451-978
Sequence    

Annotation

kegg
ID tcc:TCM_030139
description Cysteine-rich RLK 10, putative
nr
ID XP_007025962.1
description Cysteine-rich RLK 10, putative [Theobroma cacao]
swissprot
ID Q9M0X5
description Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=3 SV=1
trembl
ID A0A061GNA2
description Cysteine-rich RLK 10, putative OS=Theobroma cacao GN=TCM_030139 PE=4 SV=1
Gene Ontology
ID GO:0004672
description cysteine-rich rlk

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_107543_010 0.0 - - Cysteine-rich RLK 10, putative [Theobroma cacao]
2 Hb_000280_110 0.0927584655 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
3 Hb_046101_010 0.1034571591 - - PREDICTED: putative serine/threonine-protein kinase-like protein CCR3 [Jatropha curcas]
4 Hb_001894_040 0.1039492128 - - PREDICTED: carbonic anhydrase 2 isoform X1 [Jatropha curcas]
5 Hb_009803_030 0.118337866 - - PREDICTED: probable receptor protein kinase TMK1 [Jatropha curcas]
6 Hb_000489_020 0.1216598322 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 isoform X1 [Populus euphratica]
7 Hb_074312_020 0.1222109814 - - cytochrome P450, putative [Ricinus communis]
8 Hb_006316_030 0.1229583443 - - aldehyde oxidase, putative [Ricinus communis]
9 Hb_000668_160 0.1234460791 - - PREDICTED: sulfate transporter 1.3-like [Jatropha curcas]
10 Hb_033045_010 0.1246898924 - - copine, putative [Ricinus communis]
11 Hb_009581_040 0.125182838 - - hypothetical protein B456_011G052100 [Gossypium raimondii]
12 Hb_000819_010 0.1258029828 - - Receptor-like protein kinase 1, putative [Theobroma cacao]
13 Hb_002600_010 0.1263945348 - - Allene oxide cyclase 4, chloroplast precursor, putative [Ricinus communis]
14 Hb_001369_070 0.1270608233 - - unnamed protein product [Vitis vinifera]
15 Hb_000720_210 0.1276299871 - - carbonyl reductase, putative [Ricinus communis]
16 Hb_000563_120 0.1296388643 - - hypothetical protein JCGZ_18936 [Jatropha curcas]
17 Hb_001862_060 0.1323981136 - - PREDICTED: uncharacterized protein LOC105639802 isoform X1 [Jatropha curcas]
18 Hb_002518_270 0.1341279979 - - glycogen phosphorylase, putative [Ricinus communis]
19 Hb_038777_010 0.1343481242 transcription factor TF Family: G2-like PREDICTED: probable transcription factor KAN2 isoform X1 [Populus euphratica]
20 Hb_003106_210 0.1362869971 - - PREDICTED: UDP-glycosyltransferase 74B1-like [Jatropha curcas]

Gene co-expression network

sample Hb_107543_010 Hb_107543_010 Hb_000280_110 Hb_000280_110 Hb_107543_010--Hb_000280_110 Hb_046101_010 Hb_046101_010 Hb_107543_010--Hb_046101_010 Hb_001894_040 Hb_001894_040 Hb_107543_010--Hb_001894_040 Hb_009803_030 Hb_009803_030 Hb_107543_010--Hb_009803_030 Hb_000489_020 Hb_000489_020 Hb_107543_010--Hb_000489_020 Hb_074312_020 Hb_074312_020 Hb_107543_010--Hb_074312_020 Hb_002276_100 Hb_002276_100 Hb_000280_110--Hb_002276_100 Hb_000819_010 Hb_000819_010 Hb_000280_110--Hb_000819_010 Hb_000280_110--Hb_009803_030 Hb_002600_010 Hb_002600_010 Hb_000280_110--Hb_002600_010 Hb_000280_110--Hb_046101_010 Hb_020285_010 Hb_020285_010 Hb_046101_010--Hb_020285_010 Hb_001369_070 Hb_001369_070 Hb_046101_010--Hb_001369_070 Hb_046101_010--Hb_074312_020 Hb_046101_010--Hb_002276_100 Hb_046101_010--Hb_001894_040 Hb_000085_230 Hb_000085_230 Hb_001894_040--Hb_000085_230 Hb_008226_120 Hb_008226_120 Hb_001894_040--Hb_008226_120 Hb_000579_180 Hb_000579_180 Hb_001894_040--Hb_000579_180 Hb_001862_060 Hb_001862_060 Hb_001894_040--Hb_001862_060 Hb_001636_010 Hb_001636_010 Hb_001894_040--Hb_001636_010 Hb_007420_010 Hb_007420_010 Hb_009803_030--Hb_007420_010 Hb_167272_010 Hb_167272_010 Hb_009803_030--Hb_167272_010 Hb_009803_030--Hb_000819_010 Hb_001515_030 Hb_001515_030 Hb_009803_030--Hb_001515_030 Hb_009803_030--Hb_046101_010 Hb_000265_020 Hb_000265_020 Hb_000489_020--Hb_000265_020 Hb_001355_110 Hb_001355_110 Hb_000489_020--Hb_001355_110 Hb_005333_100 Hb_005333_100 Hb_000489_020--Hb_005333_100 Hb_001623_470 Hb_001623_470 Hb_000489_020--Hb_001623_470 Hb_152718_010 Hb_152718_010 Hb_000489_020--Hb_152718_010 Hb_001769_030 Hb_001769_030 Hb_000489_020--Hb_001769_030 Hb_003439_020 Hb_003439_020 Hb_074312_020--Hb_003439_020 Hb_074312_020--Hb_001862_060 Hb_074312_020--Hb_002276_100 Hb_134017_010 Hb_134017_010 Hb_074312_020--Hb_134017_010 Hb_074312_020--Hb_001369_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 35.7525 8.047 8.66985 0 0.692484
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.491603 0.0965631 0 22.6534 10.2267

CAGE analysis