Hb_006316_030

Information

Type -
Description -
Location Contig6316: 37361-60239
Sequence    

Annotation

kegg
ID rcu:RCOM_0952150
description aldehyde oxidase, putative (EC:1.2.3.1)
nr
ID XP_002515844.1
description aldehyde oxidase, putative [Ricinus communis]
swissprot
ID Q7G9P4
description Abscisic-aldehyde oxidase OS=Arabidopsis thaliana GN=AAO3 PE=1 SV=1
trembl
ID B9RQ25
description Aldehyde oxidase, putative OS=Ricinus communis GN=RCOM_0952150 PE=4 SV=1
Gene Ontology
ID GO:0004031
description indole-3-acetaldehyde oxidase-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51847: 37457-40055 , PASA_asmbl_51848: 40076-59559 , PASA_asmbl_51849: 60031-60275
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006316_030 0.0 - - aldehyde oxidase, putative [Ricinus communis]
2 Hb_038777_010 0.1030450053 transcription factor TF Family: G2-like PREDICTED: probable transcription factor KAN2 isoform X1 [Populus euphratica]
3 Hb_003106_210 0.1101219667 - - PREDICTED: UDP-glycosyltransferase 74B1-like [Jatropha curcas]
4 Hb_001862_060 0.1164712855 - - PREDICTED: uncharacterized protein LOC105639802 isoform X1 [Jatropha curcas]
5 Hb_001894_040 0.1167935561 - - PREDICTED: carbonic anhydrase 2 isoform X1 [Jatropha curcas]
6 Hb_001636_010 0.117525775 - - hypothetical protein JCGZ_01264 [Jatropha curcas]
7 Hb_001085_230 0.1206117572 - - PREDICTED: receptor like protein kinase S.2 [Jatropha curcas]
8 Hb_001365_050 0.1222291709 - - hypothetical protein POPTR_0019s128601g, partial [Populus trichocarpa]
9 Hb_107543_010 0.1229583443 - - Cysteine-rich RLK 10, putative [Theobroma cacao]
10 Hb_046101_010 0.1270698782 - - PREDICTED: putative serine/threonine-protein kinase-like protein CCR3 [Jatropha curcas]
11 Hb_000037_010 0.1276815017 - - PREDICTED: cation/H(+) antiporter 18-like [Jatropha curcas]
12 Hb_002600_010 0.128799284 - - Allene oxide cyclase 4, chloroplast precursor, putative [Ricinus communis]
13 Hb_007894_030 0.1294647273 - - calcium-dependent protein kinase, putative [Ricinus communis]
14 Hb_000720_210 0.1294926194 - - carbonyl reductase, putative [Ricinus communis]
15 Hb_000563_120 0.1310825072 - - hypothetical protein JCGZ_18936 [Jatropha curcas]
16 Hb_001369_070 0.1316682833 - - unnamed protein product [Vitis vinifera]
17 Hb_000085_230 0.1327428784 - - PREDICTED: probable long-chain-alcohol O-fatty-acyltransferase 5 [Jatropha curcas]
18 Hb_010417_100 0.1328097601 - - PREDICTED: respiratory burst oxidase homolog protein A [Jatropha curcas]
19 Hb_007919_030 0.1360930164 - - -
20 Hb_074312_020 0.1387597843 - - cytochrome P450, putative [Ricinus communis]

Gene co-expression network

sample Hb_006316_030 Hb_006316_030 Hb_038777_010 Hb_038777_010 Hb_006316_030--Hb_038777_010 Hb_003106_210 Hb_003106_210 Hb_006316_030--Hb_003106_210 Hb_001862_060 Hb_001862_060 Hb_006316_030--Hb_001862_060 Hb_001894_040 Hb_001894_040 Hb_006316_030--Hb_001894_040 Hb_001636_010 Hb_001636_010 Hb_006316_030--Hb_001636_010 Hb_001085_230 Hb_001085_230 Hb_006316_030--Hb_001085_230 Hb_020285_010 Hb_020285_010 Hb_038777_010--Hb_020285_010 Hb_005357_020 Hb_005357_020 Hb_038777_010--Hb_005357_020 Hb_000497_100 Hb_000497_100 Hb_038777_010--Hb_000497_100 Hb_038777_010--Hb_001862_060 Hb_007894_030 Hb_007894_030 Hb_038777_010--Hb_007894_030 Hb_000028_460 Hb_000028_460 Hb_038777_010--Hb_000028_460 Hb_001365_050 Hb_001365_050 Hb_003106_210--Hb_001365_050 Hb_002218_070 Hb_002218_070 Hb_003106_210--Hb_002218_070 Hb_006501_170 Hb_006501_170 Hb_003106_210--Hb_006501_170 Hb_000067_030 Hb_000067_030 Hb_003106_210--Hb_000067_030 Hb_107543_010 Hb_107543_010 Hb_003106_210--Hb_107543_010 Hb_074312_020 Hb_074312_020 Hb_001862_060--Hb_074312_020 Hb_003439_020 Hb_003439_020 Hb_001862_060--Hb_003439_020 Hb_134017_010 Hb_134017_010 Hb_001862_060--Hb_134017_010 Hb_009581_040 Hb_009581_040 Hb_001862_060--Hb_009581_040 Hb_001862_060--Hb_001894_040 Hb_000085_230 Hb_000085_230 Hb_001894_040--Hb_000085_230 Hb_008226_120 Hb_008226_120 Hb_001894_040--Hb_008226_120 Hb_000579_180 Hb_000579_180 Hb_001894_040--Hb_000579_180 Hb_046101_010 Hb_046101_010 Hb_001894_040--Hb_046101_010 Hb_001894_040--Hb_001636_010 Hb_010417_100 Hb_010417_100 Hb_001636_010--Hb_010417_100 Hb_001636_010--Hb_020285_010 Hb_001636_010--Hb_007894_030 Hb_001421_010 Hb_001421_010 Hb_001636_010--Hb_001421_010 Hb_001636_010--Hb_038777_010 Hb_000037_010 Hb_000037_010 Hb_001085_230--Hb_000037_010 Hb_001819_010 Hb_001819_010 Hb_001085_230--Hb_001819_010 Hb_123560_050 Hb_123560_050 Hb_001085_230--Hb_123560_050 Hb_000563_120 Hb_000563_120 Hb_001085_230--Hb_000563_120 Hb_007919_030 Hb_007919_030 Hb_001085_230--Hb_007919_030 Hb_000377_160 Hb_000377_160 Hb_001085_230--Hb_000377_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0445817 9.58592 2.36254 3.52643 0.032885 0.0813559
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0295925 0.411434 0.0447753 8.69202 4.09707

CAGE analysis