Hb_010326_030

Information

Type -
Description -
Location Contig10326: 12171-14948
Sequence    

Annotation

kegg
ID pop:POPTR_0014s02910g
description hypothetical protein
nr
ID XP_012071660.1
description PREDICTED: abscisic acid 8'-hydroxylase 4-like [Jatropha curcas]
swissprot
ID Q9LJK2
description Abscisic acid 8'-hydroxylase 4 OS=Arabidopsis thaliana GN=CYP707A4 PE=2 SV=2
trembl
ID A0A067L1H3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04260 PE=3 SV=1
Gene Ontology
ID GO:0005506
description abscisic acid 8 -hydroxylase 4-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010326_030 0.0 - - PREDICTED: abscisic acid 8'-hydroxylase 4-like [Jatropha curcas]
2 Hb_094637_010 0.1283388155 - - PREDICTED: uncharacterized protein LOC105642042 [Jatropha curcas]
3 Hb_001678_030 0.1334837268 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like [Jatropha curcas]
4 Hb_000487_140 0.1337594493 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
5 Hb_001158_080 0.1338106199 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Jatropha curcas]
6 Hb_000934_290 0.1348720244 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001638_110 0.1379948845 - - conserved hypothetical protein [Ricinus communis]
8 Hb_009581_050 0.1388560773 - - hypothetical protein CISIN_1g0025812mg, partial [Citrus sinensis]
9 Hb_001329_040 0.1394531702 - - hypothetical protein RCOM_1345340 [Ricinus communis]
10 Hb_008140_060 0.1419178566 - - Cytochrome P450, putative [Theobroma cacao]
11 Hb_000852_050 0.1429023768 - - hypothetical protein POPTR_0018s02450g [Populus trichocarpa]
12 Hb_003052_120 0.143827056 - - hypothetical protein POPTR_0008s10970g [Populus trichocarpa]
13 Hb_002551_090 0.1445222611 - - hypothetical protein JCGZ_17224 [Jatropha curcas]
14 Hb_003805_080 0.1453714154 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
15 Hb_012807_060 0.1493994106 - - ABC transporter family protein [Hevea brasiliensis]
16 Hb_000844_100 0.1532252667 - - hypothetical protein JCGZ_04351 [Jatropha curcas]
17 Hb_003787_060 0.1556265791 - - PREDICTED: mechanosensitive ion channel protein 8-like [Jatropha curcas]
18 Hb_008001_020 0.1557562994 transcription factor TF Family: GRAS PREDICTED: protein SHORT-ROOT-like [Populus euphratica]
19 Hb_002173_060 0.1580515527 - - hypothetical protein JCGZ_12464 [Jatropha curcas]
20 Hb_012807_140 0.1582560967 transcription factor TF Family: MYB hypothetical protein POPTR_0009s01270g [Populus trichocarpa]

Gene co-expression network

sample Hb_010326_030 Hb_010326_030 Hb_094637_010 Hb_094637_010 Hb_010326_030--Hb_094637_010 Hb_001678_030 Hb_001678_030 Hb_010326_030--Hb_001678_030 Hb_000487_140 Hb_000487_140 Hb_010326_030--Hb_000487_140 Hb_001158_080 Hb_001158_080 Hb_010326_030--Hb_001158_080 Hb_000934_290 Hb_000934_290 Hb_010326_030--Hb_000934_290 Hb_001638_110 Hb_001638_110 Hb_010326_030--Hb_001638_110 Hb_008140_060 Hb_008140_060 Hb_094637_010--Hb_008140_060 Hb_094637_010--Hb_000934_290 Hb_009581_050 Hb_009581_050 Hb_094637_010--Hb_009581_050 Hb_094637_010--Hb_001638_110 Hb_000000_060 Hb_000000_060 Hb_094637_010--Hb_000000_060 Hb_039496_010 Hb_039496_010 Hb_094637_010--Hb_039496_010 Hb_000616_050 Hb_000616_050 Hb_001678_030--Hb_000616_050 Hb_001408_050 Hb_001408_050 Hb_001678_030--Hb_001408_050 Hb_000029_370 Hb_000029_370 Hb_001678_030--Hb_000029_370 Hb_001329_040 Hb_001329_040 Hb_001678_030--Hb_001329_040 Hb_001838_050 Hb_001838_050 Hb_001678_030--Hb_001838_050 Hb_032050_050 Hb_032050_050 Hb_001678_030--Hb_032050_050 Hb_003058_180 Hb_003058_180 Hb_000487_140--Hb_003058_180 Hb_003805_080 Hb_003805_080 Hb_000487_140--Hb_003805_080 Hb_006120_010 Hb_006120_010 Hb_000487_140--Hb_006120_010 Hb_000761_030 Hb_000761_030 Hb_000487_140--Hb_000761_030 Hb_001863_080 Hb_001863_080 Hb_000487_140--Hb_001863_080 Hb_188923_010 Hb_188923_010 Hb_000487_140--Hb_188923_010 Hb_001158_080--Hb_000934_290 Hb_002551_090 Hb_002551_090 Hb_001158_080--Hb_002551_090 Hb_184942_010 Hb_184942_010 Hb_001158_080--Hb_184942_010 Hb_001158_080--Hb_008140_060 Hb_009642_010 Hb_009642_010 Hb_001158_080--Hb_009642_010 Hb_003787_060 Hb_003787_060 Hb_001158_080--Hb_003787_060 Hb_000934_290--Hb_008140_060 Hb_003788_010 Hb_003788_010 Hb_000934_290--Hb_003788_010 Hb_000934_290--Hb_039496_010 Hb_000934_290--Hb_003787_060 Hb_019229_020 Hb_019229_020 Hb_001638_110--Hb_019229_020 Hb_000238_060 Hb_000238_060 Hb_001638_110--Hb_000238_060 Hb_005228_170 Hb_005228_170 Hb_001638_110--Hb_005228_170 Hb_002671_110 Hb_002671_110 Hb_001638_110--Hb_002671_110 Hb_000852_050 Hb_000852_050 Hb_001638_110--Hb_000852_050 Hb_000649_030 Hb_000649_030 Hb_001638_110--Hb_000649_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.602379 0.0418753 0.50198 0.0253096 0.0118482
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0307802 0 0 1.23703 0.101374

CAGE analysis