Hb_043768_010

Information

Type -
Description -
Location Contig43768: 980-1810
Sequence    

Annotation

kegg
ID rcu:RCOM_0539820
description Heat shock factor protein, putative
nr
ID XP_012070195.1
description PREDICTED: heat stress transcription factor A-4a-like [Jatropha curcas]
swissprot
ID Q94J16
description Heat stress transcription factor A-4b OS=Oryza sativa subsp. japonica GN=HSFA4B PE=2 SV=1
trembl
ID A0A067L5N1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03936 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_043768_010 0.0 - - PREDICTED: heat stress transcription factor A-4a-like [Jatropha curcas]
2 Hb_002217_200 0.1320051658 - - PREDICTED: gibberellin 2-beta-dioxygenase 2 [Jatropha curcas]
3 Hb_001365_050 0.1376401551 - - hypothetical protein POPTR_0019s128601g, partial [Populus trichocarpa]
4 Hb_001006_280 0.1446198163 - - PREDICTED: glutamate decarboxylase 4 [Jatropha curcas]
5 Hb_000034_030 0.1453319206 - - protein phosphatase 2c, putative [Ricinus communis]
6 Hb_003106_210 0.1475003833 - - PREDICTED: UDP-glycosyltransferase 74B1-like [Jatropha curcas]
7 Hb_003767_010 0.1568754099 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Jatropha curcas]
8 Hb_006316_030 0.1618342194 - - aldehyde oxidase, putative [Ricinus communis]
9 Hb_038670_010 0.1730862554 - - Major allergen Pru ar, putative [Ricinus communis]
10 Hb_006594_060 0.1733087709 transcription factor TF Family: HSF PREDICTED: heat shock factor protein HSF24 [Jatropha curcas]
11 Hb_007919_030 0.1765525892 - - -
12 Hb_001675_130 0.1779600708 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein GLABRA 2 [Jatropha curcas]
13 Hb_000720_210 0.1805139672 - - carbonyl reductase, putative [Ricinus communis]
14 Hb_000059_080 0.1814173945 - - PREDICTED: uncharacterized protein LOC105629177 [Jatropha curcas]
15 Hb_000377_160 0.1832024215 - - PREDICTED: oligopeptide transporter 3 [Jatropha curcas]
16 Hb_000254_150 0.1849268478 - - PREDICTED: homeobox-leucine zipper protein GLABRA 2 [Jatropha curcas]
17 Hb_000649_280 0.1880536087 - - PREDICTED: F-box protein PP2-B10-like [Pyrus x bretschneideri]
18 Hb_008692_010 0.1890077373 - - putative polyol transported protein 2 [Hevea brasiliensis]
19 Hb_082683_010 0.1892800534 - - PREDICTED: uncharacterized protein LOC104898613 [Beta vulgaris subsp. vulgaris]
20 Hb_000996_130 0.1892906766 - - PREDICTED: remorin-like [Populus euphratica]

Gene co-expression network

sample Hb_043768_010 Hb_043768_010 Hb_002217_200 Hb_002217_200 Hb_043768_010--Hb_002217_200 Hb_001365_050 Hb_001365_050 Hb_043768_010--Hb_001365_050 Hb_001006_280 Hb_001006_280 Hb_043768_010--Hb_001006_280 Hb_000034_030 Hb_000034_030 Hb_043768_010--Hb_000034_030 Hb_003106_210 Hb_003106_210 Hb_043768_010--Hb_003106_210 Hb_003767_010 Hb_003767_010 Hb_043768_010--Hb_003767_010 Hb_002217_200--Hb_003767_010 Hb_007919_030 Hb_007919_030 Hb_002217_200--Hb_007919_030 Hb_029866_110 Hb_029866_110 Hb_002217_200--Hb_029866_110 Hb_109489_010 Hb_109489_010 Hb_002217_200--Hb_109489_010 Hb_001819_010 Hb_001819_010 Hb_002217_200--Hb_001819_010 Hb_000377_160 Hb_000377_160 Hb_002217_200--Hb_000377_160 Hb_001365_050--Hb_003106_210 Hb_006316_030 Hb_006316_030 Hb_001365_050--Hb_006316_030 Hb_000067_030 Hb_000067_030 Hb_001365_050--Hb_000067_030 Hb_001365_050--Hb_007919_030 Hb_001365_050--Hb_000377_160 Hb_001006_280--Hb_000034_030 Hb_038670_010 Hb_038670_010 Hb_001006_280--Hb_038670_010 Hb_001405_150 Hb_001405_150 Hb_001006_280--Hb_001405_150 Hb_000720_210 Hb_000720_210 Hb_001006_280--Hb_000720_210 Hb_001006_280--Hb_001365_050 Hb_000963_200 Hb_000963_200 Hb_000034_030--Hb_000963_200 Hb_000236_050 Hb_000236_050 Hb_000034_030--Hb_000236_050 Hb_000034_030--Hb_038670_010 Hb_005237_040 Hb_005237_040 Hb_000034_030--Hb_005237_040 Hb_000034_030--Hb_001405_150 Hb_003106_210--Hb_006316_030 Hb_002218_070 Hb_002218_070 Hb_003106_210--Hb_002218_070 Hb_006501_170 Hb_006501_170 Hb_003106_210--Hb_006501_170 Hb_003106_210--Hb_000067_030 Hb_107543_010 Hb_107543_010 Hb_003106_210--Hb_107543_010 Hb_003767_010--Hb_000377_160 Hb_000649_280 Hb_000649_280 Hb_003767_010--Hb_000649_280 Hb_003767_010--Hb_029866_110 Hb_123560_050 Hb_123560_050 Hb_003767_010--Hb_123560_050 Hb_003767_010--Hb_109489_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.628033 0.129745 0.16952 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0641861 0.0504719 0 0.795719 0.406762

CAGE analysis