Hb_002173_060

Information

Type -
Description -
Location Contig2173: 105406-109159
Sequence    

Annotation

kegg
ID pxb:103961606
description uncharacterized LOC103961606
nr
ID KDP32003.1
description hypothetical protein JCGZ_12464 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KAF7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12464 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002173_060 0.0 - - hypothetical protein JCGZ_12464 [Jatropha curcas]
2 Hb_000844_100 0.1146790377 - - hypothetical protein JCGZ_04351 [Jatropha curcas]
3 Hb_182021_010 0.1320750371 - - sucrose transporter 4 [Hevea brasiliensis]
4 Hb_008140_060 0.1339183023 - - Cytochrome P450, putative [Theobroma cacao]
5 Hb_000589_180 0.1359596219 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 9 [Jatropha curcas]
6 Hb_009581_050 0.1403577422 - - hypothetical protein CISIN_1g0025812mg, partial [Citrus sinensis]
7 Hb_094637_010 0.1409480251 - - PREDICTED: uncharacterized protein LOC105642042 [Jatropha curcas]
8 Hb_004044_030 0.1506214241 - - PREDICTED: uncharacterized protein LOC105639335 [Jatropha curcas]
9 Hb_012807_060 0.1525826549 - - ABC transporter family protein [Hevea brasiliensis]
10 Hb_004586_400 0.1525910364 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
11 Hb_003430_020 0.1541225455 - - PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Jatropha curcas]
12 Hb_001862_060 0.1544993151 - - PREDICTED: uncharacterized protein LOC105639802 isoform X1 [Jatropha curcas]
13 Hb_010326_030 0.1580515527 - - PREDICTED: abscisic acid 8'-hydroxylase 4-like [Jatropha curcas]
14 Hb_000740_130 0.1581306675 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
15 Hb_000236_050 0.1590717585 - - phosphate transporter [Manihot esculenta]
16 Hb_000934_290 0.1594780554 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001158_080 0.1602439664 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Jatropha curcas]
18 Hb_172633_020 0.1606503734 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Populus euphratica]
19 Hb_006120_030 0.1621151318 - - -
20 Hb_134017_010 0.1625734581 - - kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_002173_060 Hb_002173_060 Hb_000844_100 Hb_000844_100 Hb_002173_060--Hb_000844_100 Hb_182021_010 Hb_182021_010 Hb_002173_060--Hb_182021_010 Hb_008140_060 Hb_008140_060 Hb_002173_060--Hb_008140_060 Hb_000589_180 Hb_000589_180 Hb_002173_060--Hb_000589_180 Hb_009581_050 Hb_009581_050 Hb_002173_060--Hb_009581_050 Hb_094637_010 Hb_094637_010 Hb_002173_060--Hb_094637_010 Hb_000844_100--Hb_008140_060 Hb_000740_130 Hb_000740_130 Hb_000844_100--Hb_000740_130 Hb_000844_100--Hb_182021_010 Hb_001158_080 Hb_001158_080 Hb_000844_100--Hb_001158_080 Hb_000844_100--Hb_094637_010 Hb_182021_010--Hb_000740_130 Hb_009785_010 Hb_009785_010 Hb_182021_010--Hb_009785_010 Hb_088916_010 Hb_088916_010 Hb_182021_010--Hb_088916_010 Hb_002551_090 Hb_002551_090 Hb_182021_010--Hb_002551_090 Hb_012807_060 Hb_012807_060 Hb_182021_010--Hb_012807_060 Hb_008140_060--Hb_094637_010 Hb_000934_290 Hb_000934_290 Hb_008140_060--Hb_000934_290 Hb_008140_060--Hb_001158_080 Hb_008140_060--Hb_088916_010 Hb_008140_060--Hb_002551_090 Hb_003430_020 Hb_003430_020 Hb_000589_180--Hb_003430_020 Hb_002007_140 Hb_002007_140 Hb_000589_180--Hb_002007_140 Hb_000086_370 Hb_000086_370 Hb_000589_180--Hb_000086_370 Hb_000589_180--Hb_009581_050 Hb_002475_100 Hb_002475_100 Hb_000589_180--Hb_002475_100 Hb_000000_060 Hb_000000_060 Hb_000589_180--Hb_000000_060 Hb_000407_080 Hb_000407_080 Hb_009581_050--Hb_000407_080 Hb_009581_050--Hb_012807_060 Hb_009581_050--Hb_002007_140 Hb_003807_020 Hb_003807_020 Hb_009581_050--Hb_003807_020 Hb_000335_050 Hb_000335_050 Hb_009581_050--Hb_000335_050 Hb_009581_050--Hb_003430_020 Hb_094637_010--Hb_000934_290 Hb_094637_010--Hb_009581_050 Hb_001638_110 Hb_001638_110 Hb_094637_010--Hb_001638_110 Hb_094637_010--Hb_000000_060 Hb_039496_010 Hb_039496_010 Hb_094637_010--Hb_039496_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.27399 0.0990631 0.688296 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0966608 0 0 1.77284 0.443112

CAGE analysis