Hb_000086_370

Information

Type -
Description -
Location Contig86: 287665-290690
Sequence    

Annotation

kegg
ID rcu:RCOM_0258730
description electron carrier, putative
nr
ID EMS51759.1
description Long-chain-alcohol oxidase FAO2 [Triticum urartu]
swissprot
ID B5WWZ9
description Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus GN=FAO2 PE=2 SV=1
trembl
ID M7ZUG8
description Long-chain-alcohol oxidase FAO2 OS=Triticum urartu GN=TRIUR3_24431 PE=4 SV=1
Gene Ontology
ID GO:0016020
description long-chain-alcohol oxidase fao2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000086_370 0.0 - - Long-chain-alcohol oxidase FAO2 [Triticum urartu]
2 Hb_000657_030 0.0910469248 transcription factor TF Family: bZIP Ocs element-binding factor, putative [Ricinus communis]
3 Hb_000521_300 0.1084512795 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Jatropha curcas]
4 Hb_004195_170 0.1107575263 - - ATP binding protein, putative [Ricinus communis]
5 Hb_000120_980 0.1185575755 - - PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 5-like [Jatropha curcas]
6 Hb_000589_180 0.1206835472 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 9 [Jatropha curcas]
7 Hb_012807_060 0.1237097422 - - ABC transporter family protein [Hevea brasiliensis]
8 Hb_000684_010 0.1263432947 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
9 Hb_001252_040 0.1272300227 - - PREDICTED: wall-associated receptor kinase-like 20 [Jatropha curcas]
10 Hb_000579_180 0.1281180548 transcription factor TF Family: bZIP PREDICTED: ocs element-binding factor 1-like [Jatropha curcas]
11 Hb_009581_040 0.1284575973 - - hypothetical protein B456_011G052100 [Gossypium raimondii]
12 Hb_003430_020 0.1348570529 - - PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Jatropha curcas]
13 Hb_002475_100 0.1377154755 - - PREDICTED: uncharacterized protein LOC105645451 [Jatropha curcas]
14 Hb_182021_010 0.1378482998 - - sucrose transporter 4 [Hevea brasiliensis]
15 Hb_001862_060 0.1396074592 - - PREDICTED: uncharacterized protein LOC105639802 isoform X1 [Jatropha curcas]
16 Hb_007709_010 0.1401300644 - - -
17 Hb_000740_130 0.1407599867 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
18 Hb_000085_230 0.1417977428 - - PREDICTED: probable long-chain-alcohol O-fatty-acyltransferase 5 [Jatropha curcas]
19 Hb_117168_010 0.1419898233 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
20 Hb_008226_120 0.1450340652 - - ATP binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000086_370 Hb_000086_370 Hb_000657_030 Hb_000657_030 Hb_000086_370--Hb_000657_030 Hb_000521_300 Hb_000521_300 Hb_000086_370--Hb_000521_300 Hb_004195_170 Hb_004195_170 Hb_000086_370--Hb_004195_170 Hb_000120_980 Hb_000120_980 Hb_000086_370--Hb_000120_980 Hb_000589_180 Hb_000589_180 Hb_000086_370--Hb_000589_180 Hb_012807_060 Hb_012807_060 Hb_000086_370--Hb_012807_060 Hb_009581_040 Hb_009581_040 Hb_000657_030--Hb_009581_040 Hb_003430_020 Hb_003430_020 Hb_000657_030--Hb_003430_020 Hb_000085_230 Hb_000085_230 Hb_000657_030--Hb_000085_230 Hb_000579_180 Hb_000579_180 Hb_000657_030--Hb_000579_180 Hb_000657_030--Hb_004195_170 Hb_001252_040 Hb_001252_040 Hb_000521_300--Hb_001252_040 Hb_000088_160 Hb_000088_160 Hb_000521_300--Hb_000088_160 Hb_001373_010 Hb_001373_010 Hb_000521_300--Hb_001373_010 Hb_011214_140 Hb_011214_140 Hb_000521_300--Hb_011214_140 Hb_004195_190 Hb_004195_190 Hb_000521_300--Hb_004195_190 Hb_003453_030 Hb_003453_030 Hb_004195_170--Hb_003453_030 Hb_004195_170--Hb_012807_060 Hb_022501_020 Hb_022501_020 Hb_004195_170--Hb_022501_020 Hb_001408_050 Hb_001408_050 Hb_004195_170--Hb_001408_050 Hb_000684_010 Hb_000684_010 Hb_000120_980--Hb_000684_010 Hb_005333_100 Hb_005333_100 Hb_000120_980--Hb_005333_100 Hb_000876_050 Hb_000876_050 Hb_000120_980--Hb_000876_050 Hb_005542_110 Hb_005542_110 Hb_000120_980--Hb_005542_110 Hb_002475_100 Hb_002475_100 Hb_000120_980--Hb_002475_100 Hb_000589_180--Hb_003430_020 Hb_002007_140 Hb_002007_140 Hb_000589_180--Hb_002007_140 Hb_009581_050 Hb_009581_050 Hb_000589_180--Hb_009581_050 Hb_000589_180--Hb_002475_100 Hb_000000_060 Hb_000000_060 Hb_000589_180--Hb_000000_060 Hb_012807_060--Hb_009581_050 Hb_003052_120 Hb_003052_120 Hb_012807_060--Hb_003052_120 Hb_002551_090 Hb_002551_090 Hb_012807_060--Hb_002551_090 Hb_012807_060--Hb_000579_180 Hb_012807_060--Hb_003430_020 Hb_008226_120 Hb_008226_120 Hb_012807_060--Hb_008226_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.425702 19.8265 1.54879 5.46743 0.483733 0.305582
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.140232 0.202286 0.209054 19.3353 4.62044

CAGE analysis