Hb_000844_100

Information

Type -
Description -
Location Contig844: 140502-142494
Sequence    

Annotation

kegg
ID pop:POPTR_0014s03740g
description putative cytochrome P450 family protein
nr
ID KDP38426.1
description hypothetical protein JCGZ_04351 [Jatropha curcas]
swissprot
ID O49859
description Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1
trembl
ID A0A067KQD7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04351 PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 cyp82d47-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60186: 140492-141232 , PASA_asmbl_60187: 141447-142396
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000844_100 0.0 - - hypothetical protein JCGZ_04351 [Jatropha curcas]
2 Hb_008140_060 0.0847629465 - - Cytochrome P450, putative [Theobroma cacao]
3 Hb_000740_130 0.1006539463 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
4 Hb_182021_010 0.1103720992 - - sucrose transporter 4 [Hevea brasiliensis]
5 Hb_001158_080 0.1136406053 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Jatropha curcas]
6 Hb_002173_060 0.1146790377 - - hypothetical protein JCGZ_12464 [Jatropha curcas]
7 Hb_094637_010 0.1230352387 - - PREDICTED: uncharacterized protein LOC105642042 [Jatropha curcas]
8 Hb_088916_010 0.1231513185 - - PREDICTED: receptor-like serine/threonine-protein kinase At4g25390 [Jatropha curcas]
9 Hb_002551_090 0.1245711596 - - hypothetical protein JCGZ_17224 [Jatropha curcas]
10 Hb_002122_040 0.1256282585 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
11 Hb_000934_290 0.1273669468 - - conserved hypothetical protein [Ricinus communis]
12 Hb_050241_010 0.1304539945 - - PREDICTED: uncharacterized protein LOC105129233 isoform X1 [Populus euphratica]
13 Hb_002490_090 0.1307919495 - - PREDICTED: uncharacterized protein LOC105133003 [Populus euphratica]
14 Hb_004712_020 0.1331356245 - - hypothetical protein JCGZ_00782 [Jatropha curcas]
15 Hb_009642_010 0.1354924749 - - Disease resistance protein RFL1, putative [Ricinus communis]
16 Hb_012807_140 0.136460695 transcription factor TF Family: MYB hypothetical protein POPTR_0009s01270g [Populus trichocarpa]
17 Hb_172633_020 0.1367141313 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Populus euphratica]
18 Hb_009510_060 0.1370736612 - - -
19 Hb_184942_010 0.1411357719 - - STS14 protein precursor, putative [Ricinus communis]
20 Hb_012807_060 0.1412607758 - - ABC transporter family protein [Hevea brasiliensis]

Gene co-expression network

sample Hb_000844_100 Hb_000844_100 Hb_008140_060 Hb_008140_060 Hb_000844_100--Hb_008140_060 Hb_000740_130 Hb_000740_130 Hb_000844_100--Hb_000740_130 Hb_182021_010 Hb_182021_010 Hb_000844_100--Hb_182021_010 Hb_001158_080 Hb_001158_080 Hb_000844_100--Hb_001158_080 Hb_002173_060 Hb_002173_060 Hb_000844_100--Hb_002173_060 Hb_094637_010 Hb_094637_010 Hb_000844_100--Hb_094637_010 Hb_008140_060--Hb_094637_010 Hb_000934_290 Hb_000934_290 Hb_008140_060--Hb_000934_290 Hb_008140_060--Hb_001158_080 Hb_088916_010 Hb_088916_010 Hb_008140_060--Hb_088916_010 Hb_002551_090 Hb_002551_090 Hb_008140_060--Hb_002551_090 Hb_000740_130--Hb_182021_010 Hb_000740_130--Hb_088916_010 Hb_132515_010 Hb_132515_010 Hb_000740_130--Hb_132515_010 Hb_054865_030 Hb_054865_030 Hb_000740_130--Hb_054865_030 Hb_008692_010 Hb_008692_010 Hb_000740_130--Hb_008692_010 Hb_009785_010 Hb_009785_010 Hb_182021_010--Hb_009785_010 Hb_182021_010--Hb_088916_010 Hb_182021_010--Hb_002551_090 Hb_012807_060 Hb_012807_060 Hb_182021_010--Hb_012807_060 Hb_001158_080--Hb_000934_290 Hb_001158_080--Hb_002551_090 Hb_184942_010 Hb_184942_010 Hb_001158_080--Hb_184942_010 Hb_009642_010 Hb_009642_010 Hb_001158_080--Hb_009642_010 Hb_003787_060 Hb_003787_060 Hb_001158_080--Hb_003787_060 Hb_002173_060--Hb_182021_010 Hb_002173_060--Hb_008140_060 Hb_000589_180 Hb_000589_180 Hb_002173_060--Hb_000589_180 Hb_009581_050 Hb_009581_050 Hb_002173_060--Hb_009581_050 Hb_002173_060--Hb_094637_010 Hb_094637_010--Hb_000934_290 Hb_094637_010--Hb_009581_050 Hb_001638_110 Hb_001638_110 Hb_094637_010--Hb_001638_110 Hb_000000_060 Hb_000000_060 Hb_094637_010--Hb_000000_060 Hb_039496_010 Hb_039496_010 Hb_094637_010--Hb_039496_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.179738 7.81704 0.452468 5.15001 0.0701339 0.0102637
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.072275 0 0 13.4918 3.39902

CAGE analysis