Hb_007802_020

Information

Type -
Description -
Location Contig7802: 12210-14656
Sequence    

Annotation

kegg
ID egr:104427101
description receptor-like protein 12
nr
ID XP_010038544.1
description PREDICTED: receptor-like protein 12 [Eucalyptus grandis]
swissprot
ID C0LGH2
description Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=2 SV=2
trembl
ID A0A072TXH0
description LRR receptor-like kinase family protein OS=Medicago truncatula GN=MTR_7g007550 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007802_020 0.0 - - PREDICTED: receptor-like protein 12 [Eucalyptus grandis]
2 Hb_116349_040 0.2417577091 transcription factor TF Family: Orphans PREDICTED: two-component response regulator ARR5 [Jatropha curcas]
3 Hb_007042_010 0.2594228359 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
4 Hb_005779_040 0.2664429041 - - -
5 Hb_006453_010 0.2727728189 - - PREDICTED: glutaredoxin-C9 [Jatropha curcas]
6 Hb_012098_170 0.2809571735 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_16874 [Jatropha curcas]
7 Hb_001825_020 0.2862694369 - - nucleic acid binding protein, putative [Ricinus communis]
8 Hb_002774_090 0.2871710787 - - conserved hypothetical protein [Ricinus communis]
9 Hb_067034_030 0.2925929779 - - ATP-binding cassette transporter, putative [Ricinus communis]
10 Hb_002043_010 0.2926381287 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
11 Hb_000042_250 0.2939491527 - - PREDICTED: uncharacterized protein LOC105632812 isoform X1 [Jatropha curcas]
12 Hb_001568_110 0.2980555266 - - BnaA02g12660D [Brassica napus]
13 Hb_000840_040 0.2990468067 - - monoxygenase, putative [Ricinus communis]
14 Hb_003623_070 0.3000379687 - - ubiquitin-protein ligase, putative [Ricinus communis]
15 Hb_003835_040 0.3009957401 - - PREDICTED: UDP-glycosyltransferase 91A1-like [Jatropha curcas]
16 Hb_006573_300 0.3014232521 - - ATP binding protein, putative [Ricinus communis]
17 Hb_126380_010 0.303522643 desease resistance Gene Name: NB-ARC ATP binding protein, putative [Ricinus communis]
18 Hb_000163_300 0.3036949864 - - multidrug resistance-associated protein 2, 6 (mrp2, 6), abc-transoprter, putative [Ricinus communis]
19 Hb_002821_020 0.3048414078 desease resistance Gene Name: ABC_tran PREDICTED: ABC transporter C family member 4 [Vitis vinifera]
20 Hb_002450_170 0.3061635142 transcription factor TF Family: FAR1 Protein FAR1-RELATED SEQUENCE 5 [Glycine soja]

Gene co-expression network

sample Hb_007802_020 Hb_007802_020 Hb_116349_040 Hb_116349_040 Hb_007802_020--Hb_116349_040 Hb_007042_010 Hb_007042_010 Hb_007802_020--Hb_007042_010 Hb_005779_040 Hb_005779_040 Hb_007802_020--Hb_005779_040 Hb_006453_010 Hb_006453_010 Hb_007802_020--Hb_006453_010 Hb_012098_170 Hb_012098_170 Hb_007802_020--Hb_012098_170 Hb_001825_020 Hb_001825_020 Hb_007802_020--Hb_001825_020 Hb_008066_070 Hb_008066_070 Hb_116349_040--Hb_008066_070 Hb_007576_200 Hb_007576_200 Hb_116349_040--Hb_007576_200 Hb_000023_250 Hb_000023_250 Hb_116349_040--Hb_000023_250 Hb_116349_040--Hb_006453_010 Hb_006446_010 Hb_006446_010 Hb_116349_040--Hb_006446_010 Hb_001053_090 Hb_001053_090 Hb_116349_040--Hb_001053_090 Hb_003494_040 Hb_003494_040 Hb_007042_010--Hb_003494_040 Hb_126103_010 Hb_126103_010 Hb_007042_010--Hb_126103_010 Hb_001568_110 Hb_001568_110 Hb_007042_010--Hb_001568_110 Hb_007042_010--Hb_116349_040 Hb_000840_040 Hb_000840_040 Hb_007042_010--Hb_000840_040 Hb_044724_010 Hb_044724_010 Hb_005779_040--Hb_044724_010 Hb_002774_090 Hb_002774_090 Hb_005779_040--Hb_002774_090 Hb_000589_220 Hb_000589_220 Hb_005779_040--Hb_000589_220 Hb_003894_100 Hb_003894_100 Hb_005779_040--Hb_003894_100 Hb_000679_240 Hb_000679_240 Hb_005779_040--Hb_000679_240 Hb_067034_030 Hb_067034_030 Hb_005779_040--Hb_067034_030 Hb_006573_300 Hb_006573_300 Hb_006453_010--Hb_006573_300 Hb_000853_060 Hb_000853_060 Hb_006453_010--Hb_000853_060 Hb_001114_070 Hb_001114_070 Hb_006453_010--Hb_001114_070 Hb_000165_210 Hb_000165_210 Hb_006453_010--Hb_000165_210 Hb_000983_080 Hb_000983_080 Hb_006453_010--Hb_000983_080 Hb_012098_170--Hb_067034_030 Hb_012098_170--Hb_001114_070 Hb_007919_040 Hb_007919_040 Hb_012098_170--Hb_007919_040 Hb_006501_170 Hb_006501_170 Hb_012098_170--Hb_006501_170 Hb_012098_170--Hb_006573_300 Hb_000645_240 Hb_000645_240 Hb_012098_170--Hb_000645_240 Hb_010620_020 Hb_010620_020 Hb_001825_020--Hb_010620_020 Hb_001825_020--Hb_006501_170 Hb_005736_070 Hb_005736_070 Hb_001825_020--Hb_005736_070 Hb_001195_730 Hb_001195_730 Hb_001825_020--Hb_001195_730 Hb_002284_030 Hb_002284_030 Hb_001825_020--Hb_002284_030 Hb_011214_140 Hb_011214_140 Hb_001825_020--Hb_011214_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.110913 0.984762 0 0.0568471 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.340957 0.178612 0.154276 0.625785 0.341052

CAGE analysis