Hb_000983_080

Information

Type transcription factor
Description TF Family: bZIP
Location Contig983: 63207-63692
Sequence    

Annotation

kegg
ID pop:POPTR_0005s25290g
description POPTRDRAFT_715285; bZIP transcription factor family protein
nr
ID XP_012071923.1
description PREDICTED: ocs element-binding factor 1-like [Jatropha curcas]
swissprot
ID P24068
description Ocs element-binding factor 1 OS=Zea mays GN=OBF1 PE=2 SV=2
trembl
ID A0A067KQY2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04477 PE=4 SV=1
Gene Ontology
ID GO:0003700
description ocs element-binding factor 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64453: 62841-64448
cDNA
(Sanger)
(ID:Location)		 034_F05.ab1: 63613-64448

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000983_080 0.0 transcription factor TF Family: bZIP PREDICTED: ocs element-binding factor 1-like [Jatropha curcas]
2 Hb_009193_100 0.1396906326 - - hypothetical protein JCGZ_15709 [Jatropha curcas]
3 Hb_012317_020 0.1417616037 - - PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
4 Hb_000699_230 0.1604772025 - - Ankyrin repeat family protein, putative [Theobroma cacao]
5 Hb_128589_010 0.1738529682 - - PREDICTED: cyclin-dependent kinase inhibitor 5 [Jatropha curcas]
6 Hb_011872_020 0.1747025991 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH128 [Jatropha curcas]
7 Hb_000059_300 0.1771414324 - - caspase, putative [Ricinus communis]
8 Hb_005779_030 0.1791243379 - - PREDICTED: nuclear pore complex protein NUP62 [Jatropha curcas]
9 Hb_012340_060 0.1811137487 - - conserved hypothetical protein [Ricinus communis]
10 Hb_006446_010 0.1817393419 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_001341_100 0.1847864457 - - hypothetical protein JCGZ_05568 [Jatropha curcas]
12 Hb_000625_090 0.1873495409 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000997_180 0.1881736733 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001959_120 0.1882094122 - - PREDICTED: uncharacterized protein LOC105638487 [Jatropha curcas]
15 Hb_000084_220 0.1888738576 - - PREDICTED: uncharacterized protein LOC105634692 [Jatropha curcas]
16 Hb_168319_010 0.1891368731 - - PREDICTED: ACT domain-containing protein ACR4 isoform X2 [Jatropha curcas]
17 Hb_006816_480 0.1906176769 - - PREDICTED: F-box/LRR-repeat protein 3 isoform X1 [Jatropha curcas]
18 Hb_001049_020 0.1919270243 - - conserved hypothetical protein [Ricinus communis]
19 Hb_004631_210 0.1937837145 - - hypothetical protein POPTR_0007s05070g [Populus trichocarpa]
20 Hb_002660_120 0.196638833 - - PREDICTED: putative serine/threonine-protein kinase [Populus euphratica]

Gene co-expression network

sample Hb_000983_080 Hb_000983_080 Hb_009193_100 Hb_009193_100 Hb_000983_080--Hb_009193_100 Hb_012317_020 Hb_012317_020 Hb_000983_080--Hb_012317_020 Hb_000699_230 Hb_000699_230 Hb_000983_080--Hb_000699_230 Hb_128589_010 Hb_128589_010 Hb_000983_080--Hb_128589_010 Hb_011872_020 Hb_011872_020 Hb_000983_080--Hb_011872_020 Hb_000059_300 Hb_000059_300 Hb_000983_080--Hb_000059_300 Hb_009193_100--Hb_000699_230 Hb_001623_160 Hb_001623_160 Hb_009193_100--Hb_001623_160 Hb_000625_090 Hb_000625_090 Hb_009193_100--Hb_000625_090 Hb_000381_110 Hb_000381_110 Hb_009193_100--Hb_000381_110 Hb_000997_180 Hb_000997_180 Hb_009193_100--Hb_000997_180 Hb_000251_030 Hb_000251_030 Hb_009193_100--Hb_000251_030 Hb_012317_020--Hb_000699_230 Hb_001726_110 Hb_001726_110 Hb_012317_020--Hb_001726_110 Hb_000061_120 Hb_000061_120 Hb_012317_020--Hb_000061_120 Hb_012317_020--Hb_000625_090 Hb_003038_140 Hb_003038_140 Hb_012317_020--Hb_003038_140 Hb_000699_230--Hb_000997_180 Hb_000110_300 Hb_000110_300 Hb_000699_230--Hb_000110_300 Hb_001268_120 Hb_001268_120 Hb_000699_230--Hb_001268_120 Hb_000699_230--Hb_000625_090 Hb_002915_060 Hb_002915_060 Hb_000699_230--Hb_002915_060 Hb_001956_060 Hb_001956_060 Hb_128589_010--Hb_001956_060 Hb_128589_010--Hb_000110_300 Hb_000205_250 Hb_000205_250 Hb_128589_010--Hb_000205_250 Hb_009646_010 Hb_009646_010 Hb_128589_010--Hb_009646_010 Hb_000345_320 Hb_000345_320 Hb_128589_010--Hb_000345_320 Hb_128589_010--Hb_000625_090 Hb_005016_010 Hb_005016_010 Hb_011872_020--Hb_005016_010 Hb_177215_030 Hb_177215_030 Hb_011872_020--Hb_177215_030 Hb_002170_020 Hb_002170_020 Hb_011872_020--Hb_002170_020 Hb_000258_050 Hb_000258_050 Hb_011872_020--Hb_000258_050 Hb_002660_120 Hb_002660_120 Hb_011872_020--Hb_002660_120 Hb_006816_480 Hb_006816_480 Hb_011872_020--Hb_006816_480 Hb_001486_200 Hb_001486_200 Hb_000059_300--Hb_001486_200 Hb_005779_030 Hb_005779_030 Hb_000059_300--Hb_005779_030 Hb_000056_350 Hb_000056_350 Hb_000059_300--Hb_000056_350 Hb_000059_300--Hb_009646_010 Hb_001341_200 Hb_001341_200 Hb_000059_300--Hb_001341_200 Hb_000181_210 Hb_000181_210 Hb_000059_300--Hb_000181_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
115.581 390.233 96.6059 307.211 5.58621 6.51808
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
156.575 225.888 209.366 380.301 161.131

CAGE analysis