Hb_001473_140

Information

Type -
Description -
Location Contig1473: 120262-136746
Sequence    

Annotation

kegg
ID rcu:RCOM_1020440
description hypothetical protein
nr
ID XP_012092647.1
description PREDICTED: protein SULFUR DEFICIENCY-INDUCED 1 [Jatropha curcas]
swissprot
ID Q8L730
description Protein SULFUR DEFICIENCY-INDUCED 2 OS=Arabidopsis thaliana GN=At1g04770 PE=2 SV=1
trembl
ID A0A067J997
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06408 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001473_140 0.0 - - PREDICTED: protein SULFUR DEFICIENCY-INDUCED 1 [Jatropha curcas]
2 Hb_011310_100 0.1300990109 - - hypothetical protein CICLE_v10008199mg [Citrus clementina]
3 Hb_001478_040 0.1675555605 - - PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Jatropha curcas]
4 Hb_000836_290 0.1684833459 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
5 Hb_000069_610 0.1698146375 - - PREDICTED: protein SUPPRESSOR OF PHYA-105 1 [Jatropha curcas]
6 Hb_000589_110 0.1729176587 - - PREDICTED: uncharacterized protein LOC105647614 isoform X1 [Jatropha curcas]
7 Hb_001050_050 0.1753649649 - - PREDICTED: pentatricopeptide repeat-containing protein At5g57250, mitochondrial [Jatropha curcas]
8 Hb_010137_060 0.1758750377 - - PREDICTED: uncharacterized protein LOC105634409 [Jatropha curcas]
9 Hb_000445_090 0.1761690367 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ASHH2 [Jatropha curcas]
10 Hb_000230_290 0.1771070464 - - protein phosphatase 2c, putative [Ricinus communis]
11 Hb_001301_270 0.177816584 - - PREDICTED: heat shock 70 kDa protein 16 [Jatropha curcas]
12 Hb_000022_190 0.1788091576 - - PREDICTED: pentatricopeptide repeat-containing protein At3g22690-like [Jatropha curcas]
13 Hb_012799_050 0.1801713261 - - PREDICTED: remorin [Jatropha curcas]
14 Hb_000291_150 0.1801887392 - - PREDICTED: serine hydroxymethyltransferase 7 [Jatropha curcas]
15 Hb_001018_090 0.1802001904 - - PREDICTED: eukaryotic translation initiation factor 3 subunit L-like [Jatropha curcas]
16 Hb_009178_060 0.1811575104 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic isoform X1 [Jatropha curcas]
17 Hb_002232_390 0.1815126695 - - PREDICTED: uncharacterized protein LOC105635994 [Jatropha curcas]
18 Hb_001329_250 0.1822827778 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105642692 isoform X1 [Jatropha curcas]
19 Hb_000645_280 0.1846066891 - - PREDICTED: AMSH-like ubiquitin thioesterase 3 [Jatropha curcas]
20 Hb_005511_150 0.1848987096 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic isoform X5 [Populus euphratica]

Gene co-expression network

sample Hb_001473_140 Hb_001473_140 Hb_011310_100 Hb_011310_100 Hb_001473_140--Hb_011310_100 Hb_001478_040 Hb_001478_040 Hb_001473_140--Hb_001478_040 Hb_000836_290 Hb_000836_290 Hb_001473_140--Hb_000836_290 Hb_000069_610 Hb_000069_610 Hb_001473_140--Hb_000069_610 Hb_000589_110 Hb_000589_110 Hb_001473_140--Hb_000589_110 Hb_001050_050 Hb_001050_050 Hb_001473_140--Hb_001050_050 Hb_011310_100--Hb_001478_040 Hb_004032_200 Hb_004032_200 Hb_011310_100--Hb_004032_200 Hb_000022_190 Hb_000022_190 Hb_011310_100--Hb_000022_190 Hb_007597_010 Hb_007597_010 Hb_011310_100--Hb_007597_010 Hb_006261_050 Hb_006261_050 Hb_011310_100--Hb_006261_050 Hb_001478_040--Hb_004032_200 Hb_001478_040--Hb_000069_610 Hb_005701_050 Hb_005701_050 Hb_001478_040--Hb_005701_050 Hb_000059_230 Hb_000059_230 Hb_001478_040--Hb_000059_230 Hb_001478_040--Hb_007597_010 Hb_170077_010 Hb_170077_010 Hb_001478_040--Hb_170077_010 Hb_004631_150 Hb_004631_150 Hb_000836_290--Hb_004631_150 Hb_001512_040 Hb_001512_040 Hb_000836_290--Hb_001512_040 Hb_000261_050 Hb_000261_050 Hb_000836_290--Hb_000261_050 Hb_171334_010 Hb_171334_010 Hb_000836_290--Hb_171334_010 Hb_000347_040 Hb_000347_040 Hb_000836_290--Hb_000347_040 Hb_032202_220 Hb_032202_220 Hb_000836_290--Hb_032202_220 Hb_000788_030 Hb_000788_030 Hb_000069_610--Hb_000788_030 Hb_006846_170 Hb_006846_170 Hb_000069_610--Hb_006846_170 Hb_004705_160 Hb_004705_160 Hb_000069_610--Hb_004705_160 Hb_088584_010 Hb_088584_010 Hb_000069_610--Hb_088584_010 Hb_000748_090 Hb_000748_090 Hb_000069_610--Hb_000748_090 Hb_007769_040 Hb_007769_040 Hb_000589_110--Hb_007769_040 Hb_013405_080 Hb_013405_080 Hb_000589_110--Hb_013405_080 Hb_005250_010 Hb_005250_010 Hb_000589_110--Hb_005250_010 Hb_025477_050 Hb_025477_050 Hb_000589_110--Hb_025477_050 Hb_007192_090 Hb_007192_090 Hb_000589_110--Hb_007192_090 Hb_000555_020 Hb_000555_020 Hb_000589_110--Hb_000555_020 Hb_052128_010 Hb_052128_010 Hb_001050_050--Hb_052128_010 Hb_001050_050--Hb_000022_190 Hb_005754_030 Hb_005754_030 Hb_001050_050--Hb_005754_030 Hb_089246_010 Hb_089246_010 Hb_001050_050--Hb_089246_010 Hb_002986_070 Hb_002986_070 Hb_001050_050--Hb_002986_070 Hb_001396_240 Hb_001396_240 Hb_001050_050--Hb_001396_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.10611 0.564071 0.452412 0.713217 0.354373 0.644568
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0968845 0.406509 0.476801 0.111601 1.00864

CAGE analysis