Hb_001421_030

Information

Type -
Description -
Location Contig1421: 57919-64440
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001421_030 0.0 - - -
2 Hb_022149_020 0.1695785955 - - conserved hypothetical protein [Ricinus communis]
3 Hb_004807_050 0.1710184438 - - hypothetical protein POPTR_0004s17300g [Populus trichocarpa]
4 Hb_001087_010 0.2034314596 - - PREDICTED: uncharacterized protein LOC105630042 [Jatropha curcas]
5 Hb_009838_020 0.2083073219 - - PREDICTED: cysteine-rich repeat secretory protein 3 [Jatropha curcas]
6 Hb_002110_090 0.2178586169 - - PREDICTED: transport inhibitor response 1-like protein [Jatropha curcas]
7 Hb_001146_050 0.2227783704 - - -
8 Hb_001478_070 0.2268124613 - - PREDICTED: uncharacterized protein LOC105789550 [Gossypium raimondii]
9 Hb_000181_230 0.2307344432 - - copper ion binding protein, putative [Ricinus communis]
10 Hb_000574_170 0.2333893108 - - PREDICTED: pyrophosphate-energized vacuolar membrane proton pump-like [Jatropha curcas]
11 Hb_000977_290 0.2344787636 - - PREDICTED: CMP-sialic acid transporter 2-like isoform X2 [Jatropha curcas]
12 Hb_004602_020 0.2361299055 transcription factor TF Family: SET PREDICTED: N-lysine methyltransferase setd6 isoform X2 [Jatropha curcas]
13 Hb_004330_020 0.2369990773 - - PREDICTED: uncharacterized protein LOC105650086 [Jatropha curcas]
14 Hb_021854_010 0.2373117135 - - -
15 Hb_000333_030 0.2396672008 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
16 Hb_000167_040 0.2397314913 - - PREDICTED: serine carboxypeptidase-like [Jatropha curcas]
17 Hb_009620_070 0.2400388229 - - PREDICTED: probable potassium transporter 13 [Jatropha curcas]
18 Hb_000107_550 0.2426235749 - - PREDICTED: monosaccharide-sensing protein 2 [Jatropha curcas]
19 Hb_033683_010 0.2442122605 - - myo inositol monophosphatase, putative [Ricinus communis]
20 Hb_000964_170 0.2447052202 - - Cellulose synthase A catalytic subunit 6 [UDP-forming], putative [Ricinus communis]

Gene co-expression network

sample Hb_001421_030 Hb_001421_030 Hb_022149_020 Hb_022149_020 Hb_001421_030--Hb_022149_020 Hb_004807_050 Hb_004807_050 Hb_001421_030--Hb_004807_050 Hb_001087_010 Hb_001087_010 Hb_001421_030--Hb_001087_010 Hb_009838_020 Hb_009838_020 Hb_001421_030--Hb_009838_020 Hb_002110_090 Hb_002110_090 Hb_001421_030--Hb_002110_090 Hb_001146_050 Hb_001146_050 Hb_001421_030--Hb_001146_050 Hb_000574_170 Hb_000574_170 Hb_022149_020--Hb_000574_170 Hb_000023_270 Hb_000023_270 Hb_022149_020--Hb_000023_270 Hb_010337_040 Hb_010337_040 Hb_022149_020--Hb_010337_040 Hb_000333_030 Hb_000333_030 Hb_022149_020--Hb_000333_030 Hb_000482_120 Hb_000482_120 Hb_022149_020--Hb_000482_120 Hb_004807_050--Hb_001087_010 Hb_021854_010 Hb_021854_010 Hb_004807_050--Hb_021854_010 Hb_000270_710 Hb_000270_710 Hb_004807_050--Hb_000270_710 Hb_150651_020 Hb_150651_020 Hb_004807_050--Hb_150651_020 Hb_004807_050--Hb_002110_090 Hb_000906_070 Hb_000906_070 Hb_001087_010--Hb_000906_070 Hb_000992_020 Hb_000992_020 Hb_001087_010--Hb_000992_020 Hb_010984_010 Hb_010984_010 Hb_001087_010--Hb_010984_010 Hb_000803_220 Hb_000803_220 Hb_001087_010--Hb_000803_220 Hb_007894_190 Hb_007894_190 Hb_001087_010--Hb_007894_190 Hb_000359_220 Hb_000359_220 Hb_001087_010--Hb_000359_220 Hb_004899_340 Hb_004899_340 Hb_009838_020--Hb_004899_340 Hb_005941_030 Hb_005941_030 Hb_009838_020--Hb_005941_030 Hb_003029_060 Hb_003029_060 Hb_009838_020--Hb_003029_060 Hb_001221_190 Hb_001221_190 Hb_009838_020--Hb_001221_190 Hb_000071_160 Hb_000071_160 Hb_009838_020--Hb_000071_160 Hb_000977_290 Hb_000977_290 Hb_009838_020--Hb_000977_290 Hb_001269_520 Hb_001269_520 Hb_002110_090--Hb_001269_520 Hb_000251_050 Hb_000251_050 Hb_002110_090--Hb_000251_050 Hb_003177_090 Hb_003177_090 Hb_002110_090--Hb_003177_090 Hb_000107_550 Hb_000107_550 Hb_002110_090--Hb_000107_550 Hb_000181_230 Hb_000181_230 Hb_002110_090--Hb_000181_230 Hb_002099_060 Hb_002099_060 Hb_002110_090--Hb_002099_060 Hb_004878_010 Hb_004878_010 Hb_001146_050--Hb_004878_010 Hb_004409_030 Hb_004409_030 Hb_001146_050--Hb_004409_030 Hb_007718_020 Hb_007718_020 Hb_001146_050--Hb_007718_020 Hb_004657_030 Hb_004657_030 Hb_001146_050--Hb_004657_030 Hb_146510_010 Hb_146510_010 Hb_001146_050--Hb_146510_010 Hb_086336_010 Hb_086336_010 Hb_001146_050--Hb_086336_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0202103 0.055528 0.0797066 0.0242921 0.0426941
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0527714 0.0888287

CAGE analysis