Hb_000992_020

Information

Type -
Description -
Location Contig992: 27106-28793
Sequence    

Annotation

kegg
ID rcu:RCOM_0009590
description monoxygenase, putative
nr
ID XP_002530077.1
description monoxygenase, putative [Ricinus communis]
swissprot
ID A6T923
description FAD-dependent urate hydroxylase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=hpxO PE=1 SV=1
trembl
ID B9SVQ8
description Monoxygenase, putative OS=Ricinus communis GN=RCOM_0009590 PE=4 SV=1
Gene Ontology
ID GO:0009540
description zeaxanthin chloroplastic-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64792: 27055-28780
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000992_020 0.0 - - monoxygenase, putative [Ricinus communis]
2 Hb_000906_070 0.1242520997 - - PREDICTED: protein SCAR2-like isoform X1 [Jatropha curcas]
3 Hb_001087_010 0.1427224358 - - PREDICTED: uncharacterized protein LOC105630042 [Jatropha curcas]
4 Hb_001213_040 0.1474830687 - - fructose-1,6-bisphosphatase, putative [Ricinus communis]
5 Hb_000251_050 0.1522311762 - - hypothetical protein JCGZ_21678 [Jatropha curcas]
6 Hb_000069_500 0.161717165 - - PREDICTED: rhodanese-like domain-containing protein 4, chloroplastic [Jatropha curcas]
7 Hb_003020_300 0.1634798928 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000359_220 0.164386387 - - PREDICTED: pentatricopeptide repeat-containing protein At2g42920, chloroplastic [Jatropha curcas]
9 Hb_000964_170 0.1736311015 - - Cellulose synthase A catalytic subunit 6 [UDP-forming], putative [Ricinus communis]
10 Hb_167775_010 0.1749101006 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
11 Hb_000748_110 0.176294457 - - Glycosyltransferase QUASIMODO1, putative [Ricinus communis]
12 Hb_002942_130 0.1772733669 - - PREDICTED: chaperone protein ClpC, chloroplastic [Jatropha curcas]
13 Hb_000031_230 0.1788457908 - - PREDICTED: probable cyclic nucleotide-gated ion channel 14 isoform X1 [Jatropha curcas]
14 Hb_000574_320 0.1789875527 - - hypothetical protein CICLE_v10024937mg [Citrus clementina]
15 Hb_000281_070 0.1796110758 - - rubisco subunit binding-protein beta subunit, rubb, putative [Ricinus communis]
16 Hb_003734_080 0.1826982972 - - myosin vIII, putative [Ricinus communis]
17 Hb_004346_040 0.1828600627 - - hypothetical protein POPTR_0016s06630g [Populus trichocarpa]
18 Hb_007894_190 0.187076856 - - PREDICTED: uncharacterized protein LOC105632935 [Jatropha curcas]
19 Hb_000589_420 0.1874922646 - - PREDICTED: uncharacterized protein LOC105647273 [Jatropha curcas]
20 Hb_025045_010 0.1886876356 - - catalytic, putative [Ricinus communis]

Gene co-expression network

sample Hb_000992_020 Hb_000992_020 Hb_000906_070 Hb_000906_070 Hb_000992_020--Hb_000906_070 Hb_001087_010 Hb_001087_010 Hb_000992_020--Hb_001087_010 Hb_001213_040 Hb_001213_040 Hb_000992_020--Hb_001213_040 Hb_000251_050 Hb_000251_050 Hb_000992_020--Hb_000251_050 Hb_000069_500 Hb_000069_500 Hb_000992_020--Hb_000069_500 Hb_003020_300 Hb_003020_300 Hb_000992_020--Hb_003020_300 Hb_004346_040 Hb_004346_040 Hb_000906_070--Hb_004346_040 Hb_001109_160 Hb_001109_160 Hb_000906_070--Hb_001109_160 Hb_006916_030 Hb_006916_030 Hb_000906_070--Hb_006916_030 Hb_000359_220 Hb_000359_220 Hb_000906_070--Hb_000359_220 Hb_029552_020 Hb_029552_020 Hb_000906_070--Hb_029552_020 Hb_013399_090 Hb_013399_090 Hb_000906_070--Hb_013399_090 Hb_001087_010--Hb_000906_070 Hb_010984_010 Hb_010984_010 Hb_001087_010--Hb_010984_010 Hb_000803_220 Hb_000803_220 Hb_001087_010--Hb_000803_220 Hb_007894_190 Hb_007894_190 Hb_001087_010--Hb_007894_190 Hb_001087_010--Hb_000359_220 Hb_001213_040--Hb_000069_500 Hb_034507_050 Hb_034507_050 Hb_001213_040--Hb_034507_050 Hb_000574_320 Hb_000574_320 Hb_001213_040--Hb_000574_320 Hb_024066_040 Hb_024066_040 Hb_001213_040--Hb_024066_040 Hb_000215_230 Hb_000215_230 Hb_001213_040--Hb_000215_230 Hb_001269_520 Hb_001269_520 Hb_000251_050--Hb_001269_520 Hb_002110_090 Hb_002110_090 Hb_000251_050--Hb_002110_090 Hb_049293_010 Hb_049293_010 Hb_000251_050--Hb_049293_010 Hb_002099_060 Hb_002099_060 Hb_000251_050--Hb_002099_060 Hb_001195_250 Hb_001195_250 Hb_000251_050--Hb_001195_250 Hb_000418_150 Hb_000418_150 Hb_000251_050--Hb_000418_150 Hb_000069_500--Hb_000574_320 Hb_005015_020 Hb_005015_020 Hb_000069_500--Hb_005015_020 Hb_000069_500--Hb_024066_040 Hb_005288_180 Hb_005288_180 Hb_000069_500--Hb_005288_180 Hb_140389_010 Hb_140389_010 Hb_000069_500--Hb_140389_010 Hb_000320_360 Hb_000320_360 Hb_003020_300--Hb_000320_360 Hb_006940_020 Hb_006940_020 Hb_003020_300--Hb_006940_020 Hb_007534_030 Hb_007534_030 Hb_003020_300--Hb_007534_030 Hb_000175_270 Hb_000175_270 Hb_003020_300--Hb_000175_270 Hb_002110_110 Hb_002110_110 Hb_003020_300--Hb_002110_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.73597 14.0213 13.7847 8.60788 6.13212 6.25854
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.10293 0.188939 0.10109 6.43958 26.7261

CAGE analysis