Hb_000215_230

Information

Type -
Description -
Location Contig215: 184357-187049
Sequence    

Annotation

kegg
ID rcu:RCOM_1048890
description hypothetical protein
nr
ID XP_012076837.1
description PREDICTED: uncharacterized protein LOC105637821 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KNC8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07346 PE=4 SV=1
Gene Ontology
ID GO:0009505
description PREDICTED: uncharacterized protein LOC105637821

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_22198: 184629-186953
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000215_230 0.0 - - PREDICTED: uncharacterized protein LOC105637821 [Jatropha curcas]
2 Hb_024066_040 0.141401893 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]
3 Hb_001195_250 0.1440917705 - - lrr receptor protein kinase, putative [Ricinus communis]
4 Hb_000574_320 0.1511211771 - - hypothetical protein CICLE_v10024937mg [Citrus clementina]
5 Hb_003786_010 0.1547921566 transcription factor TF Family: HB PREDICTED: BEL1-like homeodomain protein 2 isoform X2 [Jatropha curcas]
6 Hb_000069_500 0.1571014219 - - PREDICTED: rhodanese-like domain-containing protein 4, chloroplastic [Jatropha curcas]
7 Hb_000891_010 0.1583933382 - - conserved hypothetical protein [Ricinus communis]
8 Hb_006277_080 0.1587290103 - - PREDICTED: uncharacterized protein LOC105649701 [Jatropha curcas]
9 Hb_034507_050 0.1589233369 - - PREDICTED: uncharacterized protein LOC105646633 isoform X2 [Jatropha curcas]
10 Hb_000787_210 0.1625751823 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000103_410 0.166155591 - - PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type [Jatropha curcas]
12 Hb_000926_070 0.1665600734 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000103_230 0.1680188938 - - PREDICTED: chlorophyllase-2, chloroplastic [Jatropha curcas]
14 Hb_000107_090 0.1702497816 - - PREDICTED: kinesin KP1 [Jatropha curcas]
15 Hb_000853_050 0.1709935464 - - PREDICTED: putative GTP diphosphokinase RSH1, chloroplastic isoform X1 [Jatropha curcas]
16 Hb_001213_040 0.1720496825 - - fructose-1,6-bisphosphatase, putative [Ricinus communis]
17 Hb_000237_170 0.1723835411 transcription factor TF Family: HB PREDICTED: BEL1-like homeodomain protein 6 [Jatropha curcas]
18 Hb_032260_110 0.1732931466 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001269_520 0.1753007333 - - PREDICTED: putative receptor-like protein kinase At1g80870 [Jatropha curcas]
20 Hb_022693_080 0.1764551575 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4 [Jatropha curcas]

Gene co-expression network

sample Hb_000215_230 Hb_000215_230 Hb_024066_040 Hb_024066_040 Hb_000215_230--Hb_024066_040 Hb_001195_250 Hb_001195_250 Hb_000215_230--Hb_001195_250 Hb_000574_320 Hb_000574_320 Hb_000215_230--Hb_000574_320 Hb_003786_010 Hb_003786_010 Hb_000215_230--Hb_003786_010 Hb_000069_500 Hb_000069_500 Hb_000215_230--Hb_000069_500 Hb_000891_010 Hb_000891_010 Hb_000215_230--Hb_000891_010 Hb_034507_050 Hb_034507_050 Hb_024066_040--Hb_034507_050 Hb_024066_040--Hb_000069_500 Hb_000107_090 Hb_000107_090 Hb_024066_040--Hb_000107_090 Hb_002811_050 Hb_002811_050 Hb_024066_040--Hb_002811_050 Hb_000787_210 Hb_000787_210 Hb_024066_040--Hb_000787_210 Hb_004117_370 Hb_004117_370 Hb_024066_040--Hb_004117_370 Hb_000103_410 Hb_000103_410 Hb_001195_250--Hb_000103_410 Hb_000753_150 Hb_000753_150 Hb_001195_250--Hb_000753_150 Hb_003177_090 Hb_003177_090 Hb_001195_250--Hb_003177_090 Hb_001269_520 Hb_001269_520 Hb_001195_250--Hb_001269_520 Hb_006717_010 Hb_006717_010 Hb_001195_250--Hb_006717_010 Hb_000251_050 Hb_000251_050 Hb_001195_250--Hb_000251_050 Hb_140389_010 Hb_140389_010 Hb_000574_320--Hb_140389_010 Hb_000574_320--Hb_000069_500 Hb_011472_050 Hb_011472_050 Hb_000574_320--Hb_011472_050 Hb_006277_080 Hb_006277_080 Hb_000574_320--Hb_006277_080 Hb_000556_070 Hb_000556_070 Hb_000574_320--Hb_000556_070 Hb_002030_050 Hb_002030_050 Hb_000574_320--Hb_002030_050 Hb_003786_010--Hb_011472_050 Hb_005542_010 Hb_005542_010 Hb_003786_010--Hb_005542_010 Hb_010565_030 Hb_010565_030 Hb_003786_010--Hb_010565_030 Hb_003786_010--Hb_006277_080 Hb_025045_010 Hb_025045_010 Hb_003786_010--Hb_025045_010 Hb_003786_010--Hb_000574_320 Hb_001213_040 Hb_001213_040 Hb_000069_500--Hb_001213_040 Hb_005015_020 Hb_005015_020 Hb_000069_500--Hb_005015_020 Hb_005288_180 Hb_005288_180 Hb_000069_500--Hb_005288_180 Hb_000069_500--Hb_140389_010 Hb_000922_160 Hb_000922_160 Hb_000891_010--Hb_000922_160 Hb_006478_050 Hb_006478_050 Hb_000891_010--Hb_006478_050 Hb_001775_120 Hb_001775_120 Hb_000891_010--Hb_001775_120 Hb_093077_010 Hb_093077_010 Hb_000891_010--Hb_093077_010 Hb_002890_160 Hb_002890_160 Hb_000891_010--Hb_002890_160 Hb_001936_190 Hb_001936_190 Hb_000891_010--Hb_001936_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.36153 7.13182 8.51437 5.84268 0.979204 0.356154
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.100596 0.0197871 0 1.81239 16.8848

CAGE analysis