Hb_004657_030

Information

Type -
Description -
Location Contig4657: 15425-26388
Sequence    

Annotation

kegg
ID tcc:TCM_000682
description Nucleotide-diphospho-sugar transferases superfamily protein
nr
ID XP_012079296.1
description PREDICTED: probable beta-1,4-xylosyltransferase IRX14 [Jatropha curcas]
swissprot
ID Q8L707
description Probable beta-1,4-xylosyltransferase IRX14 OS=Arabidopsis thaliana GN=IRX14 PE=2 SV=1
trembl
ID A0A067KI83
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12446 PE=4 SV=1
Gene Ontology
ID GO:0016020
description probable beta- -xylosyltransferase irx14

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44043: 15415-17918 , PASA_asmbl_44044: 18505-25949
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004657_030 0.0 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX14 [Jatropha curcas]
2 Hb_003058_200 0.12218032 - - PREDICTED: dihydropyrimidinase [Populus euphratica]
3 Hb_000723_010 0.1306513066 - - ABC transporter family protein [Hevea brasiliensis]
4 Hb_098315_090 0.140851559 - - Aldehyde dehydrogenase family 6 member B2 [Morus notabilis]
5 Hb_002072_010 0.1413499183 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000244_260 0.1494331942 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 51 isoform X2 [Jatropha curcas]
7 Hb_150346_010 0.1549821372 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
8 Hb_005892_020 0.1564882558 - - PREDICTED: uncharacterized protein LOC105632170 isoform X1 [Jatropha curcas]
9 Hb_007380_040 0.1570426116 - - receptor-kinase, putative [Ricinus communis]
10 Hb_007123_050 0.1592099047 - - Vitellogenic carboxypeptidase, putative [Ricinus communis]
11 Hb_000442_130 0.1603890942 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000674_010 0.1604827185 - - PREDICTED: copper-transporting ATPase RAN1 isoform X1 [Jatropha curcas]
13 Hb_012528_020 0.1625556464 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase HSL2 [Jatropha curcas]
14 Hb_146510_010 0.1647330362 - - cinnamyl alcohol dehydrogenase [Hevea brasiliensis]
15 Hb_000106_020 0.1647529076 - - PREDICTED: protein TOPLESS isoform X1 [Jatropha curcas]
16 Hb_169051_010 0.1647915371 - - JHL06B08.1 [Jatropha curcas]
17 Hb_119600_050 0.165133261 - - sugar transporter, putative [Ricinus communis]
18 Hb_002814_060 0.1661429327 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 [Jatropha curcas]
19 Hb_001789_020 0.1665586357 - - PREDICTED: tripeptidyl-peptidase 2 isoform X1 [Jatropha curcas]
20 Hb_003124_030 0.1688082968 - - At4g33625-like protein [Brassica napus]

Gene co-expression network

sample Hb_004657_030 Hb_004657_030 Hb_003058_200 Hb_003058_200 Hb_004657_030--Hb_003058_200 Hb_000723_010 Hb_000723_010 Hb_004657_030--Hb_000723_010 Hb_098315_090 Hb_098315_090 Hb_004657_030--Hb_098315_090 Hb_002072_010 Hb_002072_010 Hb_004657_030--Hb_002072_010 Hb_000244_260 Hb_000244_260 Hb_004657_030--Hb_000244_260 Hb_150346_010 Hb_150346_010 Hb_004657_030--Hb_150346_010 Hb_003058_200--Hb_002072_010 Hb_000674_010 Hb_000674_010 Hb_003058_200--Hb_000674_010 Hb_000019_170 Hb_000019_170 Hb_003058_200--Hb_000019_170 Hb_021297_020 Hb_021297_020 Hb_003058_200--Hb_021297_020 Hb_002851_010 Hb_002851_010 Hb_003058_200--Hb_002851_010 Hb_003125_180 Hb_003125_180 Hb_003058_200--Hb_003125_180 Hb_069619_010 Hb_069619_010 Hb_000723_010--Hb_069619_010 Hb_001497_060 Hb_001497_060 Hb_000723_010--Hb_001497_060 Hb_000723_010--Hb_000674_010 Hb_000723_010--Hb_003058_200 Hb_075315_010 Hb_075315_010 Hb_000723_010--Hb_075315_010 Hb_020805_180 Hb_020805_180 Hb_000723_010--Hb_020805_180 Hb_000823_010 Hb_000823_010 Hb_098315_090--Hb_000823_010 Hb_000106_020 Hb_000106_020 Hb_098315_090--Hb_000106_020 Hb_000122_080 Hb_000122_080 Hb_098315_090--Hb_000122_080 Hb_002025_270 Hb_002025_270 Hb_098315_090--Hb_002025_270 Hb_000455_130 Hb_000455_130 Hb_098315_090--Hb_000455_130 Hb_030565_110 Hb_030565_110 Hb_002072_010--Hb_030565_110 Hb_002072_010--Hb_000674_010 Hb_002072_010--Hb_000244_260 Hb_005000_090 Hb_005000_090 Hb_002072_010--Hb_005000_090 Hb_002072_010--Hb_000019_170 Hb_000254_070 Hb_000254_070 Hb_000244_260--Hb_000254_070 Hb_011310_050 Hb_011310_050 Hb_000244_260--Hb_011310_050 Hb_000244_260--Hb_030565_110 Hb_000244_260--Hb_003058_200 Hb_002026_070 Hb_002026_070 Hb_000244_260--Hb_002026_070 Hb_000260_780 Hb_000260_780 Hb_150346_010--Hb_000260_780 Hb_027136_010 Hb_027136_010 Hb_150346_010--Hb_027136_010 Hb_000284_230 Hb_000284_230 Hb_150346_010--Hb_000284_230 Hb_178968_050 Hb_178968_050 Hb_150346_010--Hb_178968_050 Hb_000205_280 Hb_000205_280 Hb_150346_010--Hb_000205_280 Hb_000580_050 Hb_000580_050 Hb_150346_010--Hb_000580_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
47.0942 49.7937 38.0372 86.8099 46.2878 51.6928
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.64943 2.16414 10.3761 116.525 86.6906

CAGE analysis