Hb_001369_710

Information

Type -
Description -
Location Contig1369: 556929-562518
Sequence    

Annotation

kegg
ID rcu:RCOM_1499120
description hypothetical protein
nr
ID XP_012090399.1
description PREDICTED: uncharacterized protein LOC105648579 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JQV5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26221 PE=4 SV=1
Gene Ontology
ID GO:0003676
description isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001369_710 0.0 - - PREDICTED: uncharacterized protein LOC105648579 isoform X1 [Jatropha curcas]
2 Hb_034585_010 0.1206754736 - - PREDICTED: uncharacterized protein LOC105639637 [Jatropha curcas]
3 Hb_001016_050 0.1309582583 - - drought-inducible protein [Manihot esculenta]
4 Hb_006658_020 0.1347828297 - - PREDICTED: uncharacterized protein LOC105633529 [Jatropha curcas]
5 Hb_002400_460 0.136599216 - - PREDICTED: uncharacterized protein LOC105637599 isoform X2 [Jatropha curcas]
6 Hb_000230_130 0.1425879534 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 7 isoform X1 [Jatropha curcas]
7 Hb_000061_240 0.1435593004 - - kinase, putative [Ricinus communis]
8 Hb_000757_100 0.1446639586 - - SPla/RYanodine receptor domain-containing protein isoform 2 [Theobroma cacao]
9 Hb_000291_150 0.14810007 - - PREDICTED: serine hydroxymethyltransferase 7 [Jatropha curcas]
10 Hb_009780_030 0.1483457304 transcription factor TF Family: GRAS hypothetical protein POPTR_0005s14540g [Populus trichocarpa]
11 Hb_000465_280 0.1489784087 - - PREDICTED: pentatricopeptide repeat-containing protein At5g47360 [Jatropha curcas]
12 Hb_001279_040 0.1503374084 - - PREDICTED: probable carboxylesterase 11 [Jatropha curcas]
13 Hb_000363_240 0.1519042743 - - PREDICTED: beta-(1,2)-xylosyltransferase [Jatropha curcas]
14 Hb_002046_160 0.1525958964 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
15 Hb_005276_060 0.1532998698 - - PREDICTED: cyclin-P3-1 isoform X2 [Jatropha curcas]
16 Hb_002495_080 0.1543020549 - - PREDICTED: polygalacturonase ADPG2 [Jatropha curcas]
17 Hb_000120_130 0.154501787 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 66 [Jatropha curcas]
18 Hb_007508_060 0.1561595915 - - PREDICTED: uncharacterized protein LOC105640628 [Jatropha curcas]
19 Hb_002289_060 0.1563230643 - - conserved hypothetical protein [Ricinus communis]
20 Hb_008053_050 0.1571727275 - - PREDICTED: uncharacterized protein LOC105642980 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_001369_710 Hb_001369_710 Hb_034585_010 Hb_034585_010 Hb_001369_710--Hb_034585_010 Hb_001016_050 Hb_001016_050 Hb_001369_710--Hb_001016_050 Hb_006658_020 Hb_006658_020 Hb_001369_710--Hb_006658_020 Hb_002400_460 Hb_002400_460 Hb_001369_710--Hb_002400_460 Hb_000230_130 Hb_000230_130 Hb_001369_710--Hb_000230_130 Hb_000061_240 Hb_000061_240 Hb_001369_710--Hb_000061_240 Hb_000291_150 Hb_000291_150 Hb_034585_010--Hb_000291_150 Hb_002289_060 Hb_002289_060 Hb_034585_010--Hb_002289_060 Hb_000465_280 Hb_000465_280 Hb_034585_010--Hb_000465_280 Hb_001329_250 Hb_001329_250 Hb_034585_010--Hb_001329_250 Hb_001279_040 Hb_001279_040 Hb_034585_010--Hb_001279_040 Hb_001029_040 Hb_001029_040 Hb_034585_010--Hb_001029_040 Hb_001016_050--Hb_006658_020 Hb_005276_060 Hb_005276_060 Hb_001016_050--Hb_005276_060 Hb_000009_400 Hb_000009_400 Hb_001016_050--Hb_000009_400 Hb_004109_230 Hb_004109_230 Hb_001016_050--Hb_004109_230 Hb_008253_020 Hb_008253_020 Hb_001016_050--Hb_008253_020 Hb_007810_110 Hb_007810_110 Hb_001016_050--Hb_007810_110 Hb_004452_110 Hb_004452_110 Hb_006658_020--Hb_004452_110 Hb_002046_160 Hb_002046_160 Hb_006658_020--Hb_002046_160 Hb_000258_070 Hb_000258_070 Hb_006658_020--Hb_000258_070 Hb_002495_080 Hb_002495_080 Hb_006658_020--Hb_002495_080 Hb_132840_110 Hb_132840_110 Hb_006658_020--Hb_132840_110 Hb_024074_040 Hb_024074_040 Hb_002400_460--Hb_024074_040 Hb_002400_460--Hb_000061_240 Hb_000174_270 Hb_000174_270 Hb_002400_460--Hb_000174_270 Hb_002400_460--Hb_000291_150 Hb_004725_050 Hb_004725_050 Hb_002400_460--Hb_004725_050 Hb_000037_190 Hb_000037_190 Hb_002400_460--Hb_000037_190 Hb_004531_100 Hb_004531_100 Hb_000230_130--Hb_004531_100 Hb_000049_020 Hb_000049_020 Hb_000230_130--Hb_000049_020 Hb_000588_080 Hb_000588_080 Hb_000230_130--Hb_000588_080 Hb_000230_130--Hb_006658_020 Hb_001876_040 Hb_001876_040 Hb_000230_130--Hb_001876_040 Hb_000230_130--Hb_132840_110 Hb_030827_020 Hb_030827_020 Hb_000061_240--Hb_030827_020 Hb_000120_130 Hb_000120_130 Hb_000061_240--Hb_000120_130 Hb_002267_140 Hb_002267_140 Hb_000061_240--Hb_002267_140 Hb_000479_220 Hb_000479_220 Hb_000061_240--Hb_000479_220 Hb_138596_010 Hb_138596_010 Hb_000061_240--Hb_138596_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.67552 8.11657 2.48038 10.4535 3.88123 4.75542
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.01971 3.19178 5.09469 1.86737 9.68087

CAGE analysis