Hb_000061_240

Information

Type -
Description -
Location Contig61: 197365-203080
Sequence    

Annotation

kegg
ID rcu:RCOM_1471070
description kinase, putative (EC:2.7.10.2)
nr
ID XP_002514719.1
description kinase, putative [Ricinus communis]
swissprot
ID Q9FLJ8
description Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1
trembl
ID B9RLV0
description Kinase, putative OS=Ricinus communis GN=RCOM_1471070 PE=4 SV=1
Gene Ontology
ID GO:0004672
description probable receptor-like protein kinase at5g61350

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_50923: 197968-198156
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000061_240 0.0 - - kinase, putative [Ricinus communis]
2 Hb_030827_020 0.0799189642 - - PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Jatropha curcas]
3 Hb_000120_130 0.0838010888 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 66 [Jatropha curcas]
4 Hb_002267_140 0.0852839474 - - PREDICTED: VHS domain-containing protein At3g16270 [Jatropha curcas]
5 Hb_000479_220 0.0877570466 - - PREDICTED: uncharacterized protein LOC105644125 [Jatropha curcas]
6 Hb_002400_460 0.0878421413 - - PREDICTED: uncharacterized protein LOC105637599 isoform X2 [Jatropha curcas]
7 Hb_138596_010 0.0889194995 - - PREDICTED: BTB/POZ domain-containing protein At2g13690 [Jatropha curcas]
8 Hb_008253_030 0.0930991002 - - PREDICTED: probable carboxylesterase 11 [Jatropha curcas]
9 Hb_001016_050 0.09611458 - - drought-inducible protein [Manihot esculenta]
10 Hb_000567_190 0.0971594823 - - PREDICTED: protein SCAR3 isoform X2 [Jatropha curcas]
11 Hb_005276_060 0.0973160274 - - PREDICTED: cyclin-P3-1 isoform X2 [Jatropha curcas]
12 Hb_012395_170 0.0976913567 - - conserved hypothetical protein [Ricinus communis]
13 Hb_007943_110 0.0977562666 - - PREDICTED: basic salivary proline-rich protein 3 [Jatropha curcas]
14 Hb_000363_240 0.0984923158 - - PREDICTED: beta-(1,2)-xylosyltransferase [Jatropha curcas]
15 Hb_000060_090 0.0993055859 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor A-4a [Jatropha curcas]
16 Hb_008253_020 0.0993900588 - - PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like [Jatropha curcas]
17 Hb_002783_040 0.0999255114 transcription factor TF Family: IWS1 -
18 Hb_001674_030 0.1006940181 - - PREDICTED: BTB/POZ domain-containing protein At2g24240 [Jatropha curcas]
19 Hb_000008_220 0.1009898516 transcription factor TF Family: ARF PREDICTED: auxin response factor 10 [Jatropha curcas]
20 Hb_002843_120 0.1013841985 - - PREDICTED: uncharacterized protein LOC105645113 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000061_240 Hb_000061_240 Hb_030827_020 Hb_030827_020 Hb_000061_240--Hb_030827_020 Hb_000120_130 Hb_000120_130 Hb_000061_240--Hb_000120_130 Hb_002267_140 Hb_002267_140 Hb_000061_240--Hb_002267_140 Hb_000479_220 Hb_000479_220 Hb_000061_240--Hb_000479_220 Hb_002400_460 Hb_002400_460 Hb_000061_240--Hb_002400_460 Hb_138596_010 Hb_138596_010 Hb_000061_240--Hb_138596_010 Hb_030827_020--Hb_002267_140 Hb_003894_120 Hb_003894_120 Hb_030827_020--Hb_003894_120 Hb_000025_730 Hb_000025_730 Hb_030827_020--Hb_000025_730 Hb_030827_020--Hb_000479_220 Hb_000803_070 Hb_000803_070 Hb_030827_020--Hb_000803_070 Hb_002843_120 Hb_002843_120 Hb_030827_020--Hb_002843_120 Hb_006275_020 Hb_006275_020 Hb_000120_130--Hb_006275_020 Hb_000015_170 Hb_000015_170 Hb_000120_130--Hb_000015_170 Hb_000861_080 Hb_000861_080 Hb_000120_130--Hb_000861_080 Hb_000808_030 Hb_000808_030 Hb_000120_130--Hb_000808_030 Hb_003747_100 Hb_003747_100 Hb_000120_130--Hb_003747_100 Hb_002783_040 Hb_002783_040 Hb_000120_130--Hb_002783_040 Hb_008253_030 Hb_008253_030 Hb_002267_140--Hb_008253_030 Hb_001767_140 Hb_001767_140 Hb_002267_140--Hb_001767_140 Hb_002267_140--Hb_138596_010 Hb_002276_240 Hb_002276_240 Hb_002267_140--Hb_002276_240 Hb_002253_080 Hb_002253_080 Hb_002267_140--Hb_002253_080 Hb_002267_140--Hb_002843_120 Hb_000479_220--Hb_008253_030 Hb_000070_080 Hb_000070_080 Hb_000479_220--Hb_000070_080 Hb_000479_220--Hb_138596_010 Hb_002615_090 Hb_002615_090 Hb_000479_220--Hb_002615_090 Hb_000479_220--Hb_002253_080 Hb_000479_220--Hb_002843_120 Hb_024074_040 Hb_024074_040 Hb_002400_460--Hb_024074_040 Hb_000174_270 Hb_000174_270 Hb_002400_460--Hb_000174_270 Hb_000291_150 Hb_000291_150 Hb_002400_460--Hb_000291_150 Hb_004725_050 Hb_004725_050 Hb_002400_460--Hb_004725_050 Hb_000037_190 Hb_000037_190 Hb_002400_460--Hb_000037_190 Hb_008695_110 Hb_008695_110 Hb_138596_010--Hb_008695_110 Hb_005993_050 Hb_005993_050 Hb_138596_010--Hb_005993_050 Hb_138596_010--Hb_002843_120 Hb_000343_250 Hb_000343_250 Hb_138596_010--Hb_000343_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.09564 2.64167 1.52969 2.37186 1.75238 2.36355
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.21642 1.37124 1.68924 0.700274 1.8848

CAGE analysis