Hb_001259_110

Information

Type -
Description -
Location Contig1259: 107433-119563
Sequence    

Annotation

kegg
ID rcu:RCOM_0004130
description ATP binding protein, putative (EC:2.7.10.2)
nr
ID XP_012081177.1
description PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 3 [Jatropha curcas]
swissprot
ID Q9ASQ5
description Calmodulin-binding receptor-like cytoplasmic kinase 3 OS=Arabidopsis thaliana GN=CRCK3 PE=2 SV=1
trembl
ID A0A067K2B8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17019 PE=3 SV=1
Gene Ontology
ID GO:0004674
description calmodulin-binding receptor-like cytoplasmic kinase 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07922: 107493-132068
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001259_110 0.0 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 3 [Jatropha curcas]
2 Hb_005403_010 0.0679841669 - - PREDICTED: exocyst complex component EXO70B1-like [Jatropha curcas]
3 Hb_170077_010 0.0745669906 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X1 [Jatropha curcas]
4 Hb_002903_140 0.0777156405 - - PREDICTED: uncharacterized protein LOC105649513 [Jatropha curcas]
5 Hb_000700_060 0.0792380157 - - PREDICTED: uncharacterized protein LOC105644416 [Jatropha curcas]
6 Hb_001221_090 0.0813050356 - - PREDICTED: uncharacterized protein LOC105640211 isoform X1 [Jatropha curcas]
7 Hb_005288_140 0.0822264002 - - PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-like [Jatropha curcas]
8 Hb_004319_050 0.0823545744 - - PREDICTED: senescence-associated carboxylesterase 101-like [Populus euphratica]
9 Hb_002284_170 0.0831912386 - - PREDICTED: serine/threonine-protein kinase/endoribonuclease IRE1b [Jatropha curcas]
10 Hb_002092_070 0.0834106283 - - PREDICTED: aluminum-activated malate transporter 9-like [Jatropha curcas]
11 Hb_000189_630 0.0842231678 - - PREDICTED: serine/threonine-protein kinase EDR1 [Jatropha curcas]
12 Hb_102438_030 0.0844792954 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 37-like isoform X1 [Jatropha curcas]
13 Hb_027654_020 0.0858629924 - - PREDICTED: LIMR family protein At5g01460 [Jatropha curcas]
14 Hb_020805_150 0.0864007115 - - ubiquitin-protein ligase, putative [Ricinus communis]
15 Hb_004517_020 0.0876486833 - - PREDICTED: probable ubiquitin-like-specific protease 2B isoform X1 [Jatropha curcas]
16 Hb_001259_120 0.0877794698 - - hypothetical protein EUGRSUZ_C043222, partial [Eucalyptus grandis]
17 Hb_026198_060 0.0882845765 - - PREDICTED: calcium-dependent protein kinase 11 [Jatropha curcas]
18 Hb_152910_010 0.0895536969 - - PREDICTED: uncharacterized protein LOC105632212 [Jatropha curcas]
19 Hb_000529_060 0.0901001506 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 17 isoform X1 [Jatropha curcas]
20 Hb_000334_130 0.0902586006 - - hypothetical protein JCGZ_16781 [Jatropha curcas]

Gene co-expression network

sample Hb_001259_110 Hb_001259_110 Hb_005403_010 Hb_005403_010 Hb_001259_110--Hb_005403_010 Hb_170077_010 Hb_170077_010 Hb_001259_110--Hb_170077_010 Hb_002903_140 Hb_002903_140 Hb_001259_110--Hb_002903_140 Hb_000700_060 Hb_000700_060 Hb_001259_110--Hb_000700_060 Hb_001221_090 Hb_001221_090 Hb_001259_110--Hb_001221_090 Hb_005288_140 Hb_005288_140 Hb_001259_110--Hb_005288_140 Hb_005403_010--Hb_170077_010 Hb_000046_600 Hb_000046_600 Hb_005403_010--Hb_000046_600 Hb_023344_140 Hb_023344_140 Hb_005403_010--Hb_023344_140 Hb_000640_190 Hb_000640_190 Hb_005403_010--Hb_000640_190 Hb_000110_350 Hb_000110_350 Hb_005403_010--Hb_000110_350 Hb_000260_760 Hb_000260_760 Hb_005403_010--Hb_000260_760 Hb_170077_010--Hb_000110_350 Hb_170077_010--Hb_023344_140 Hb_000358_220 Hb_000358_220 Hb_170077_010--Hb_000358_220 Hb_000996_020 Hb_000996_020 Hb_170077_010--Hb_000996_020 Hb_002461_020 Hb_002461_020 Hb_170077_010--Hb_002461_020 Hb_030545_030 Hb_030545_030 Hb_002903_140--Hb_030545_030 Hb_008165_030 Hb_008165_030 Hb_002903_140--Hb_008165_030 Hb_000977_300 Hb_000977_300 Hb_002903_140--Hb_000977_300 Hb_004319_050 Hb_004319_050 Hb_002903_140--Hb_004319_050 Hb_007017_070 Hb_007017_070 Hb_002903_140--Hb_007017_070 Hb_096819_010 Hb_096819_010 Hb_002903_140--Hb_096819_010 Hb_002119_090 Hb_002119_090 Hb_000700_060--Hb_002119_090 Hb_004785_030 Hb_004785_030 Hb_000700_060--Hb_004785_030 Hb_006738_050 Hb_006738_050 Hb_000700_060--Hb_006738_050 Hb_002284_170 Hb_002284_170 Hb_000700_060--Hb_002284_170 Hb_004410_070 Hb_004410_070 Hb_000700_060--Hb_004410_070 Hb_000059_020 Hb_000059_020 Hb_000700_060--Hb_000059_020 Hb_003142_040 Hb_003142_040 Hb_001221_090--Hb_003142_040 Hb_002092_070 Hb_002092_070 Hb_001221_090--Hb_002092_070 Hb_004429_010 Hb_004429_010 Hb_001221_090--Hb_004429_010 Hb_011202_030 Hb_011202_030 Hb_001221_090--Hb_011202_030 Hb_001904_030 Hb_001904_030 Hb_001221_090--Hb_001904_030 Hb_001221_090--Hb_002461_020 Hb_005288_140--Hb_004319_050 Hb_000866_450 Hb_000866_450 Hb_005288_140--Hb_000866_450 Hb_026198_060 Hb_026198_060 Hb_005288_140--Hb_026198_060 Hb_000174_150 Hb_000174_150 Hb_005288_140--Hb_000174_150 Hb_005288_140--Hb_005403_010 Hb_033152_090 Hb_033152_090 Hb_005288_140--Hb_033152_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
18.1813 47.2956 29.9009 29.2567 22.1137 13.7897
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.8681 8.82741 11.8394 23.2521 18.7033

CAGE analysis