Hb_001124_040

Information

Type -
Description -
Location Contig1124: 84188-85276
Sequence    

Annotation

kegg
ID mdm:103413595
description uncharacterized LOC103413595
nr
ID XP_008350277.1
description PREDICTED: uncharacterized protein LOC103413595 [Malus domestica]
swissprot
ID -
description -
trembl
ID M5WEH8
description Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019056mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001124_040 0.0 - - PREDICTED: uncharacterized protein LOC103413595 [Malus domestica]
2 Hb_011056_020 0.2311411129 transcription factor TF Family: ERF AP2 domain transcription factor RAP2.3, putative [Ricinus communis]
3 Hb_000045_150 0.2374515219 - - PREDICTED: uncharacterized protein LOC105646518 [Jatropha curcas]
4 Hb_161072_010 0.267982469 - - -
5 Hb_012522_010 0.2795884481 - - hypothetical protein VITISV_003261 [Vitis vinifera]
6 Hb_001014_120 0.2848787896 transcription factor TF Family: ERF ethylene-responsive transcription factor ERF113 [Jatropha curcas]
7 Hb_001008_040 0.2856071115 - - Late embryogenesis abundant protein D-7, putative [Ricinus communis]
8 Hb_000512_070 0.2882971414 - - PREDICTED: GDSL esterase/lipase At1g71250-like [Jatropha curcas]
9 Hb_000637_120 0.2886952659 - - PREDICTED: aspartic proteinase Asp1 [Jatropha curcas]
10 Hb_163837_010 0.2991866223 - - PREDICTED: putative F-box protein At1g65770 [Eucalyptus grandis]
11 Hb_024468_020 0.3048150624 - - PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis]
12 Hb_007747_140 0.304985347 transcription factor TF Family: B3 transcription factor, putative [Ricinus communis]
13 Hb_003609_020 0.3052515923 desease resistance Gene Name: Clusterin hypothetical protein CISIN_1g001897mg [Citrus sinensis]
14 Hb_000733_210 0.3055165333 - - putative serine/threonine protein phosphatase [Angiostrongylus costaricensis]
15 Hb_004103_030 0.3070622067 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001004_110 0.3081726251 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001767_090 0.3082257399 - - ankyrin repeat protein [Bruguiera gymnorhiza]
18 Hb_159921_010 0.308552309 - - -
19 Hb_001946_270 0.3200565743 - - hypothetical protein JCGZ_13311 [Jatropha curcas]
20 Hb_001856_010 0.3215466005 - - DNA binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_001124_040 Hb_001124_040 Hb_011056_020 Hb_011056_020 Hb_001124_040--Hb_011056_020 Hb_000045_150 Hb_000045_150 Hb_001124_040--Hb_000045_150 Hb_161072_010 Hb_161072_010 Hb_001124_040--Hb_161072_010 Hb_012522_010 Hb_012522_010 Hb_001124_040--Hb_012522_010 Hb_001014_120 Hb_001014_120 Hb_001124_040--Hb_001014_120 Hb_001008_040 Hb_001008_040 Hb_001124_040--Hb_001008_040 Hb_004328_040 Hb_004328_040 Hb_011056_020--Hb_004328_040 Hb_007747_140 Hb_007747_140 Hb_011056_020--Hb_007747_140 Hb_011056_020--Hb_001014_120 Hb_001004_110 Hb_001004_110 Hb_011056_020--Hb_001004_110 Hb_010480_030 Hb_010480_030 Hb_011056_020--Hb_010480_030 Hb_024468_020 Hb_024468_020 Hb_011056_020--Hb_024468_020 Hb_003609_020 Hb_003609_020 Hb_000045_150--Hb_003609_020 Hb_004705_140 Hb_004705_140 Hb_000045_150--Hb_004705_140 Hb_008103_120 Hb_008103_120 Hb_000045_150--Hb_008103_120 Hb_073562_010 Hb_073562_010 Hb_000045_150--Hb_073562_010 Hb_004452_010 Hb_004452_010 Hb_000045_150--Hb_004452_010 Hb_001266_060 Hb_001266_060 Hb_000045_150--Hb_001266_060 Hb_000637_120 Hb_000637_120 Hb_161072_010--Hb_000637_120 Hb_163837_010 Hb_163837_010 Hb_161072_010--Hb_163837_010 Hb_037226_010 Hb_037226_010 Hb_161072_010--Hb_037226_010 Hb_138652_010 Hb_138652_010 Hb_161072_010--Hb_138652_010 Hb_130194_010 Hb_130194_010 Hb_161072_010--Hb_130194_010 Hb_012760_020 Hb_012760_020 Hb_012522_010--Hb_012760_020 Hb_012522_010--Hb_163837_010 Hb_000304_060 Hb_000304_060 Hb_012522_010--Hb_000304_060 Hb_004103_030 Hb_004103_030 Hb_012522_010--Hb_004103_030 Hb_000000_100 Hb_000000_100 Hb_012522_010--Hb_000000_100 Hb_001767_090 Hb_001767_090 Hb_001014_120--Hb_001767_090 Hb_001005_070 Hb_001005_070 Hb_001014_120--Hb_001005_070 Hb_001184_110 Hb_001184_110 Hb_001014_120--Hb_001184_110 Hb_002391_230 Hb_002391_230 Hb_001014_120--Hb_002391_230 Hb_112399_010 Hb_112399_010 Hb_001014_120--Hb_112399_010 Hb_001008_040--Hb_003609_020 Hb_008225_070 Hb_008225_070 Hb_001008_040--Hb_008225_070 Hb_001008_040--Hb_000045_150 Hb_000500_140 Hb_000500_140 Hb_001008_040--Hb_000500_140 Hb_000733_210 Hb_000733_210 Hb_001008_040--Hb_000733_210 Hb_159921_010 Hb_159921_010 Hb_001008_040--Hb_159921_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0533617 0.0446402 0.0401026 0 0.0250198 0.054771
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0481934 0.175469 0.155681 0

CAGE analysis