Hb_000045_150

Information

Type -
Description -
Location Contig45: 113110-115469
Sequence    

Annotation

kegg
ID rcu:RCOM_0592270
description hypothetical protein
nr
ID XP_012087772.1
description PREDICTED: uncharacterized protein LOC105646518 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LKG8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01314 PE=4 SV=1
Gene Ontology
ID GO:0005634
description PREDICTED: uncharacterized protein LOC105646518

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000045_150 0.0 - - PREDICTED: uncharacterized protein LOC105646518 [Jatropha curcas]
2 Hb_003609_020 0.1345923695 desease resistance Gene Name: Clusterin hypothetical protein CISIN_1g001897mg [Citrus sinensis]
3 Hb_004705_140 0.1631468102 transcription factor TF Family: Trihelix PREDICTED: uncharacterized protein LOC105647306 [Jatropha curcas]
4 Hb_008103_120 0.1727386007 - - hypothetical protein CISIN_1g009650mg [Citrus sinensis]
5 Hb_073562_010 0.1816540044 - - hypothetical protein POPTR_0011s036602g, partial [Populus trichocarpa]
6 Hb_004452_010 0.1936647641 - - PREDICTED: pentatricopeptide repeat-containing protein At3g58590 [Jatropha curcas]
7 Hb_001266_060 0.1942092296 - - PREDICTED: putative pentatricopeptide repeat-containing protein At3g47840 [Jatropha curcas]
8 Hb_001956_200 0.1955854109 - - pumilio/Puf RNA-binding domain-containing family protein [Populus trichocarpa]
9 Hb_009701_010 0.1971953086 - - PREDICTED: putative inactive cadmium/zinc-transporting ATPase HMA3 [Jatropha curcas]
10 Hb_003020_050 0.1978536422 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
11 Hb_000575_150 0.2002282253 - - hypothetical protein JCGZ_20198 [Jatropha curcas]
12 Hb_010480_030 0.20027528 - - PREDICTED: LETM1 and EF-hand domain-containing protein 1, mitochondrial-like [Jatropha curcas]
13 Hb_031042_020 0.2019609483 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g47460 [Jatropha curcas]
14 Hb_000733_210 0.2070776496 - - putative serine/threonine protein phosphatase [Angiostrongylus costaricensis]
15 Hb_000022_230 0.2079643638 - - hypothetical protein RCOM_0803470 [Ricinus communis]
16 Hb_024468_020 0.2092757361 - - PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis]
17 Hb_002435_110 0.2100822601 transcription factor TF Family: SNF2 PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Jatropha curcas]
18 Hb_003994_060 0.2101892795 - - PREDICTED: uncharacterized protein LOC105646110 isoform X3 [Jatropha curcas]
19 Hb_001767_090 0.2104802845 - - ankyrin repeat protein [Bruguiera gymnorhiza]
20 Hb_055384_010 0.2120077356 - - -

Gene co-expression network

sample Hb_000045_150 Hb_000045_150 Hb_003609_020 Hb_003609_020 Hb_000045_150--Hb_003609_020 Hb_004705_140 Hb_004705_140 Hb_000045_150--Hb_004705_140 Hb_008103_120 Hb_008103_120 Hb_000045_150--Hb_008103_120 Hb_073562_010 Hb_073562_010 Hb_000045_150--Hb_073562_010 Hb_004452_010 Hb_004452_010 Hb_000045_150--Hb_004452_010 Hb_001266_060 Hb_001266_060 Hb_000045_150--Hb_001266_060 Hb_003609_020--Hb_004705_140 Hb_003994_060 Hb_003994_060 Hb_003609_020--Hb_003994_060 Hb_003609_020--Hb_073562_010 Hb_024468_020 Hb_024468_020 Hb_003609_020--Hb_024468_020 Hb_001969_090 Hb_001969_090 Hb_003609_020--Hb_001969_090 Hb_009701_010 Hb_009701_010 Hb_004705_140--Hb_009701_010 Hb_004705_140--Hb_003994_060 Hb_004705_140--Hb_073562_010 Hb_002435_110 Hb_002435_110 Hb_004705_140--Hb_002435_110 Hb_003929_130 Hb_003929_130 Hb_004705_140--Hb_003929_130 Hb_003750_080 Hb_003750_080 Hb_008103_120--Hb_003750_080 Hb_000291_110 Hb_000291_110 Hb_008103_120--Hb_000291_110 Hb_093084_060 Hb_093084_060 Hb_008103_120--Hb_093084_060 Hb_005306_130 Hb_005306_130 Hb_008103_120--Hb_005306_130 Hb_181235_010 Hb_181235_010 Hb_008103_120--Hb_181235_010 Hb_000116_480 Hb_000116_480 Hb_008103_120--Hb_000116_480 Hb_000330_040 Hb_000330_040 Hb_073562_010--Hb_000330_040 Hb_003020_050 Hb_003020_050 Hb_073562_010--Hb_003020_050 Hb_002110_030 Hb_002110_030 Hb_073562_010--Hb_002110_030 Hb_008775_040 Hb_008775_040 Hb_073562_010--Hb_008775_040 Hb_001019_180 Hb_001019_180 Hb_073562_010--Hb_001019_180 Hb_002701_040 Hb_002701_040 Hb_073562_010--Hb_002701_040 Hb_001956_200 Hb_001956_200 Hb_004452_010--Hb_001956_200 Hb_004452_010--Hb_001266_060 Hb_002636_050 Hb_002636_050 Hb_004452_010--Hb_002636_050 Hb_002678_020 Hb_002678_020 Hb_004452_010--Hb_002678_020 Hb_008500_010 Hb_008500_010 Hb_004452_010--Hb_008500_010 Hb_000427_050 Hb_000427_050 Hb_004452_010--Hb_000427_050 Hb_001226_020 Hb_001226_020 Hb_001266_060--Hb_001226_020 Hb_001266_060--Hb_001956_200 Hb_001266_060--Hb_000427_050 Hb_031042_020 Hb_031042_020 Hb_001266_060--Hb_031042_020 Hb_003687_100 Hb_003687_100 Hb_001266_060--Hb_003687_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.29473 2.92942 0.924709 0.0736541 1.71139 2.32433
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.687731 2.23665 4.103 3.70337 0.30483

CAGE analysis