Hb_001021_070

Information

Type -
Description -
Location Contig1021: 45518-54699
Sequence    

Annotation

kegg
ID rcu:RCOM_1439520
description glutathione-s-transferase theta, gst, putative (EC:2.5.1.18)
nr
ID CBI32221.3
description unnamed protein product [Vitis vinifera]
swissprot
ID P46423
description Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1
trembl
ID B9T0U8
description Glutathione-s-transferase theta, gst, putative OS=Ricinus communis GN=RCOM_1439520 PE=3 SV=1
Gene Ontology
ID GO:0004364
description glutathione s-transferase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00970: 45459-46694
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001021_070 0.0 - - unnamed protein product [Vitis vinifera]
2 Hb_001646_020 0.126519107 - - PREDICTED: chitin elicitor receptor kinase 1 isoform X2 [Jatropha curcas]
3 Hb_000479_110 0.1272987983 - - PREDICTED: BAG family molecular chaperone regulator 8, chloroplastic [Jatropha curcas]
4 Hb_052135_020 0.1274880855 - - PREDICTED: MAP kinase kinase MKK1/SSP32-like [Jatropha curcas]
5 Hb_002687_060 0.1276771243 - - PREDICTED: pyruvate kinase, cytosolic isozyme [Jatropha curcas]
6 Hb_005298_020 0.1327891768 - - PREDICTED: anaphase-promoting complex subunit 2 [Jatropha curcas]
7 Hb_022092_010 0.1396529632 - - PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 3-like [Jatropha curcas]
8 Hb_013358_050 0.1401971036 - - NADP-dependent glyceraldehyde-3-phosphate dehydrogenase, putative [Ricinus communis]
9 Hb_002317_010 0.1423887081 - - PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Jatropha curcas]
10 Hb_000599_360 0.1428640676 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
11 Hb_002374_210 0.1454213624 - - PREDICTED: uncharacterized protein LOC105638976 [Jatropha curcas]
12 Hb_003683_130 0.1470694023 - - PREDICTED: enolase 1, chloroplastic [Jatropha curcas]
13 Hb_016734_020 0.1472299226 - - sugar transporter, putative [Ricinus communis]
14 Hb_027760_060 0.1481770863 - - PREDICTED: KH domain-containing protein At4g18375-like [Jatropha curcas]
15 Hb_000363_410 0.1498319028 - - hypothetical protein JCGZ_00955 [Jatropha curcas]
16 Hb_031527_080 0.1508718034 - - utp-glucose-1-phosphate uridylyltransferase, putative [Ricinus communis]
17 Hb_000258_090 0.1522599058 - - PREDICTED: KH domain-containing protein At4g18375 isoform X2 [Jatropha curcas]
18 Hb_158845_060 0.1555655984 - - PREDICTED: nudix hydrolase 3 isoform X1 [Jatropha curcas]
19 Hb_000260_400 0.1566636867 - - PREDICTED: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Jatropha curcas]
20 Hb_024758_020 0.1571675496 - - acyl-CoA binding protein 3B [Vernicia fordii]

Gene co-expression network

sample Hb_001021_070 Hb_001021_070 Hb_001646_020 Hb_001646_020 Hb_001021_070--Hb_001646_020 Hb_000479_110 Hb_000479_110 Hb_001021_070--Hb_000479_110 Hb_052135_020 Hb_052135_020 Hb_001021_070--Hb_052135_020 Hb_002687_060 Hb_002687_060 Hb_001021_070--Hb_002687_060 Hb_005298_020 Hb_005298_020 Hb_001021_070--Hb_005298_020 Hb_022092_010 Hb_022092_010 Hb_001021_070--Hb_022092_010 Hb_001511_180 Hb_001511_180 Hb_001646_020--Hb_001511_180 Hb_027760_060 Hb_027760_060 Hb_001646_020--Hb_027760_060 Hb_005074_020 Hb_005074_020 Hb_001646_020--Hb_005074_020 Hb_009615_160 Hb_009615_160 Hb_001646_020--Hb_009615_160 Hb_033799_010 Hb_033799_010 Hb_001646_020--Hb_033799_010 Hb_000080_110 Hb_000080_110 Hb_001646_020--Hb_000080_110 Hb_000599_360 Hb_000599_360 Hb_000479_110--Hb_000599_360 Hb_005741_040 Hb_005741_040 Hb_000479_110--Hb_005741_040 Hb_000705_180 Hb_000705_180 Hb_000479_110--Hb_000705_180 Hb_000111_370 Hb_000111_370 Hb_000479_110--Hb_000111_370 Hb_000205_280 Hb_000205_280 Hb_000479_110--Hb_000205_280 Hb_002603_040 Hb_002603_040 Hb_000479_110--Hb_002603_040 Hb_002317_010 Hb_002317_010 Hb_052135_020--Hb_002317_010 Hb_129204_020 Hb_129204_020 Hb_052135_020--Hb_129204_020 Hb_000567_090 Hb_000567_090 Hb_052135_020--Hb_000567_090 Hb_010068_070 Hb_010068_070 Hb_052135_020--Hb_010068_070 Hb_024758_020 Hb_024758_020 Hb_052135_020--Hb_024758_020 Hb_005833_030 Hb_005833_030 Hb_052135_020--Hb_005833_030 Hb_002687_060--Hb_005833_030 Hb_000297_030 Hb_000297_030 Hb_002687_060--Hb_000297_030 Hb_002687_060--Hb_024758_020 Hb_006468_010 Hb_006468_010 Hb_002687_060--Hb_006468_010 Hb_158845_060 Hb_158845_060 Hb_002687_060--Hb_158845_060 Hb_000122_080 Hb_000122_080 Hb_002687_060--Hb_000122_080 Hb_002374_210 Hb_002374_210 Hb_005298_020--Hb_002374_210 Hb_005298_020--Hb_158845_060 Hb_005298_020--Hb_024758_020 Hb_080147_050 Hb_080147_050 Hb_005298_020--Hb_080147_050 Hb_002007_260 Hb_002007_260 Hb_005298_020--Hb_002007_260 Hb_007894_160 Hb_007894_160 Hb_005298_020--Hb_007894_160 Hb_001689_040 Hb_001689_040 Hb_022092_010--Hb_001689_040 Hb_002392_020 Hb_002392_020 Hb_022092_010--Hb_002392_020 Hb_013358_050 Hb_013358_050 Hb_022092_010--Hb_013358_050 Hb_132101_010 Hb_132101_010 Hb_022092_010--Hb_132101_010 Hb_002284_100 Hb_002284_100 Hb_022092_010--Hb_002284_100 Hb_000365_200 Hb_000365_200 Hb_022092_010--Hb_000365_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.37012 21.185 29.4296 26.5631 11.1237 10.6797
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.73475 1.34326 18.688 37.1012 14.8925

CAGE analysis