Hb_002687_060

Information

Type -
Description -
Location Contig2687: 109149-114002
Sequence    

Annotation

kegg
ID vvi:100255934
description pyruvate kinase, cytosolic isozyme
nr
ID XP_012068541.1
description PREDICTED: pyruvate kinase, cytosolic isozyme [Jatropha curcas]
swissprot
ID Q42806
description Pyruvate kinase, cytosolic isozyme OS=Glycine max PE=2 SV=1
trembl
ID A0A067KZP4
description Pyruvate kinase OS=Jatropha curcas GN=JCGZ_24457 PE=3 SV=1
Gene Ontology
ID GO:0005737
description pyruvate cytosolic isozyme

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28061: 109112-113830 , PASA_asmbl_28062: 111325-111606
cDNA
(Sanger)
(ID:Location)		 022_B15.ab1: 110765-113703

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002687_060 0.0 - - PREDICTED: pyruvate kinase, cytosolic isozyme [Jatropha curcas]
2 Hb_005833_030 0.0772791788 - - PREDICTED: uncharacterized membrane protein At1g16860 [Jatropha curcas]
3 Hb_000297_030 0.0911356545 - - PREDICTED: mitogen-activated protein kinase kinase 2 isoform X1 [Jatropha curcas]
4 Hb_024758_020 0.1082739397 - - acyl-CoA binding protein 3B [Vernicia fordii]
5 Hb_006468_010 0.1101152697 - - PREDICTED: eukaryotic translation initiation factor isoform 4G-1 isoform X1 [Jatropha curcas]
6 Hb_158845_060 0.1102386332 - - PREDICTED: nudix hydrolase 3 isoform X1 [Jatropha curcas]
7 Hb_000122_080 0.1109349128 - - PREDICTED: staphylococcal-like nuclease CAN2 [Jatropha curcas]
8 Hb_000890_160 0.113268169 - - PREDICTED: anaphase-promoting complex subunit 7 [Jatropha curcas]
9 Hb_002596_060 0.113657076 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000994_020 0.1143094549 - - methylenetetrahydrofolate dehydrogenase, putative [Ricinus communis]
11 Hb_052135_020 0.1151960932 - - PREDICTED: MAP kinase kinase MKK1/SSP32-like [Jatropha curcas]
12 Hb_000260_770 0.1159037153 - - er lumen protein retaining receptor, putative [Ricinus communis]
13 Hb_012940_040 0.1186943759 - - Splicing factor, arginine/serine-rich, putative [Ricinus communis]
14 Hb_016734_020 0.1205102839 - - sugar transporter, putative [Ricinus communis]
15 Hb_002317_010 0.1208134473 - - PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Jatropha curcas]
16 Hb_000363_410 0.1231784379 - - hypothetical protein JCGZ_00955 [Jatropha curcas]
17 Hb_000174_140 0.1236530901 - - JHL23J11.8 [Jatropha curcas]
18 Hb_000479_110 0.1243296435 - - PREDICTED: BAG family molecular chaperone regulator 8, chloroplastic [Jatropha curcas]
19 Hb_005298_020 0.1257812453 - - PREDICTED: anaphase-promoting complex subunit 2 [Jatropha curcas]
20 Hb_001160_070 0.1258905026 - - PREDICTED: uncharacterized protein LOC105632163 [Jatropha curcas]

Gene co-expression network

sample Hb_002687_060 Hb_002687_060 Hb_005833_030 Hb_005833_030 Hb_002687_060--Hb_005833_030 Hb_000297_030 Hb_000297_030 Hb_002687_060--Hb_000297_030 Hb_024758_020 Hb_024758_020 Hb_002687_060--Hb_024758_020 Hb_006468_010 Hb_006468_010 Hb_002687_060--Hb_006468_010 Hb_158845_060 Hb_158845_060 Hb_002687_060--Hb_158845_060 Hb_000122_080 Hb_000122_080 Hb_002687_060--Hb_000122_080 Hb_000994_020 Hb_000994_020 Hb_005833_030--Hb_000994_020 Hb_005833_030--Hb_000297_030 Hb_000890_160 Hb_000890_160 Hb_005833_030--Hb_000890_160 Hb_000260_770 Hb_000260_770 Hb_005833_030--Hb_000260_770 Hb_152910_010 Hb_152910_010 Hb_005833_030--Hb_152910_010 Hb_000297_030--Hb_006468_010 Hb_000297_030--Hb_158845_060 Hb_016461_020 Hb_016461_020 Hb_000297_030--Hb_016461_020 Hb_000297_030--Hb_000890_160 Hb_000046_600 Hb_000046_600 Hb_000297_030--Hb_000046_600 Hb_000297_030--Hb_024758_020 Hb_002849_050 Hb_002849_050 Hb_024758_020--Hb_002849_050 Hb_024758_020--Hb_158845_060 Hb_005298_020 Hb_005298_020 Hb_024758_020--Hb_005298_020 Hb_032823_020 Hb_032823_020 Hb_024758_020--Hb_032823_020 Hb_003964_110 Hb_003964_110 Hb_024758_020--Hb_003964_110 Hb_006468_010--Hb_000890_160 Hb_003636_080 Hb_003636_080 Hb_006468_010--Hb_003636_080 Hb_006468_010--Hb_016461_020 Hb_115137_010 Hb_115137_010 Hb_006468_010--Hb_115137_010 Hb_089140_040 Hb_089140_040 Hb_006468_010--Hb_089140_040 Hb_158845_060--Hb_003964_110 Hb_000599_360 Hb_000599_360 Hb_158845_060--Hb_000599_360 Hb_080147_050 Hb_080147_050 Hb_158845_060--Hb_080147_050 Hb_001085_080 Hb_001085_080 Hb_158845_060--Hb_001085_080 Hb_021977_010 Hb_021977_010 Hb_158845_060--Hb_021977_010 Hb_002596_060 Hb_002596_060 Hb_000122_080--Hb_002596_060 Hb_001733_030 Hb_001733_030 Hb_000122_080--Hb_001733_030 Hb_006501_010 Hb_006501_010 Hb_000122_080--Hb_006501_010 Hb_006829_100 Hb_006829_100 Hb_000122_080--Hb_006829_100 Hb_019840_030 Hb_019840_030 Hb_000122_080--Hb_019840_030 Hb_002259_080 Hb_002259_080 Hb_000122_080--Hb_002259_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
47.2146 85.4119 101.924 87.1625 37.0107 39.6357
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.3361 14.2275 29.3449 117.498 39.1459

CAGE analysis