Hb_000297_030

Information

Type -
Description -
Location Contig297: 41189-46188
Sequence    

Annotation

kegg
ID pop:POPTR_0018s05420g
description POPTRDRAFT_577971; MAP kinase kinase family protein
nr
ID XP_012076983.1
description PREDICTED: mitogen-activated protein kinase kinase 2 isoform X1 [Jatropha curcas]
swissprot
ID Q9S7U9
description Mitogen-activated protein kinase kinase 2 OS=Arabidopsis thaliana GN=MKK2 PE=1 SV=2
trembl
ID A0A067KCC7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07442 PE=4 SV=1
Gene Ontology
ID GO:0004672
description mitogen-activated protein kinase kinase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_31085: 41289-46137
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000297_030 0.0 - - PREDICTED: mitogen-activated protein kinase kinase 2 isoform X1 [Jatropha curcas]
2 Hb_006468_010 0.0696426627 - - PREDICTED: eukaryotic translation initiation factor isoform 4G-1 isoform X1 [Jatropha curcas]
3 Hb_158845_060 0.0700283453 - - PREDICTED: nudix hydrolase 3 isoform X1 [Jatropha curcas]
4 Hb_016461_020 0.0751742378 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000890_160 0.0827246165 - - PREDICTED: anaphase-promoting complex subunit 7 [Jatropha curcas]
6 Hb_000046_600 0.0833914035 - - PREDICTED: cullin-1-like [Jatropha curcas]
7 Hb_024758_020 0.0891457282 - - acyl-CoA binding protein 3B [Vernicia fordii]
8 Hb_009615_160 0.0892462875 - - PREDICTED: pyruvate kinase, cytosolic isozyme [Jatropha curcas]
9 Hb_003636_080 0.0907029306 - - PREDICTED: sterol 3-beta-glucosyltransferase UGT80B1 [Jatropha curcas]
10 Hb_002687_060 0.0911356545 - - PREDICTED: pyruvate kinase, cytosolic isozyme [Jatropha curcas]
11 Hb_000994_020 0.0913295381 - - methylenetetrahydrofolate dehydrogenase, putative [Ricinus communis]
12 Hb_003964_110 0.0916162161 - - PREDICTED: pentatricopeptide repeat-containing protein At1g26460, mitochondrial [Jatropha curcas]
13 Hb_001085_080 0.0918952399 - - eukaryotic translation elongation factor 1-alpha [Hevea brasiliensis]
14 Hb_005833_030 0.0919058498 - - PREDICTED: uncharacterized membrane protein At1g16860 [Jatropha curcas]
15 Hb_000954_010 0.0924900575 - - PREDICTED: uncharacterized protein LOC105646975 [Jatropha curcas]
16 Hb_001558_040 0.093843177 - - PREDICTED: GPI ethanolamine phosphate transferase 2 [Jatropha curcas]
17 Hb_000034_110 0.0949744443 - - sentrin/sumo-specific protease, putative [Ricinus communis]
18 Hb_021165_010 0.0950559709 - - PREDICTED: splicing factor U2af large subunit B-like isoform X1 [Jatropha curcas]
19 Hb_002045_170 0.0956666068 - - interferon-induced guanylate-binding protein, putative [Ricinus communis]
20 Hb_000856_300 0.0961919227 - - PREDICTED: uncharacterized protein LOC105640498 [Jatropha curcas]

Gene co-expression network

sample Hb_000297_030 Hb_000297_030 Hb_006468_010 Hb_006468_010 Hb_000297_030--Hb_006468_010 Hb_158845_060 Hb_158845_060 Hb_000297_030--Hb_158845_060 Hb_016461_020 Hb_016461_020 Hb_000297_030--Hb_016461_020 Hb_000890_160 Hb_000890_160 Hb_000297_030--Hb_000890_160 Hb_000046_600 Hb_000046_600 Hb_000297_030--Hb_000046_600 Hb_024758_020 Hb_024758_020 Hb_000297_030--Hb_024758_020 Hb_006468_010--Hb_000890_160 Hb_003636_080 Hb_003636_080 Hb_006468_010--Hb_003636_080 Hb_006468_010--Hb_016461_020 Hb_115137_010 Hb_115137_010 Hb_006468_010--Hb_115137_010 Hb_089140_040 Hb_089140_040 Hb_006468_010--Hb_089140_040 Hb_003964_110 Hb_003964_110 Hb_158845_060--Hb_003964_110 Hb_000599_360 Hb_000599_360 Hb_158845_060--Hb_000599_360 Hb_080147_050 Hb_080147_050 Hb_158845_060--Hb_080147_050 Hb_001085_080 Hb_001085_080 Hb_158845_060--Hb_001085_080 Hb_021977_010 Hb_021977_010 Hb_158845_060--Hb_021977_010 Hb_000890_030 Hb_000890_030 Hb_016461_020--Hb_000890_030 Hb_005305_100 Hb_005305_100 Hb_016461_020--Hb_005305_100 Hb_016461_020--Hb_000046_600 Hb_000579_130 Hb_000579_130 Hb_016461_020--Hb_000579_130 Hb_008725_050 Hb_008725_050 Hb_000890_160--Hb_008725_050 Hb_003428_090 Hb_003428_090 Hb_000890_160--Hb_003428_090 Hb_003687_120 Hb_003687_120 Hb_000890_160--Hb_003687_120 Hb_000866_140 Hb_000866_140 Hb_000890_160--Hb_000866_140 Hb_010068_070 Hb_010068_070 Hb_000890_160--Hb_010068_070 Hb_005403_010 Hb_005403_010 Hb_000046_600--Hb_005403_010 Hb_000529_060 Hb_000529_060 Hb_000046_600--Hb_000529_060 Hb_023344_140 Hb_023344_140 Hb_000046_600--Hb_023344_140 Hb_005333_140 Hb_005333_140 Hb_000046_600--Hb_005333_140 Hb_000994_020 Hb_000994_020 Hb_000046_600--Hb_000994_020 Hb_000977_300 Hb_000977_300 Hb_000046_600--Hb_000977_300 Hb_002849_050 Hb_002849_050 Hb_024758_020--Hb_002849_050 Hb_024758_020--Hb_158845_060 Hb_005298_020 Hb_005298_020 Hb_024758_020--Hb_005298_020 Hb_032823_020 Hb_032823_020 Hb_024758_020--Hb_032823_020 Hb_024758_020--Hb_003964_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.19407 15.2826 17.3279 15.9767 8.18298 7.46662
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.745 4.62987 4.23191 16.5649 8.75113

CAGE analysis