Hb_000525_100

Information

Type -
Description -
Location Contig525: 162070-168777
Sequence    

Annotation

kegg
ID rcu:RCOM_0851840
description serine endopeptidase degp2, putative (EC:1.3.1.74)
nr
ID XP_012081992.1
description PREDICTED: protease Do-like 9 [Jatropha curcas]
swissprot
ID Q9FL12
description Protease Do-like 9 OS=Arabidopsis thaliana GN=DEGP9 PE=1 SV=1
trembl
ID A0A067LLW5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09643 PE=4 SV=1
Gene Ontology
ID GO:0043231
description protease do-like 9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000525_100 0.0 - - PREDICTED: protease Do-like 9 [Jatropha curcas]
2 Hb_009270_040 0.0653634302 - - -
3 Hb_005288_080 0.0681784469 - - conserved hypothetical protein [Ricinus communis]
4 Hb_002615_120 0.0693586386 - - PREDICTED: rho GTPase-activating protein 7 isoform X1 [Jatropha curcas]
5 Hb_003096_060 0.0697300292 - - PREDICTED: LMBR1 domain-containing protein 2 homolog A [Jatropha curcas]
6 Hb_032202_080 0.073298201 - - PREDICTED: peroxisome biogenesis protein 16-like isoform X1 [Jatropha curcas]
7 Hb_000679_340 0.0750739895 - - PREDICTED: uncharacterized protein LOC105650070 isoform X1 [Jatropha curcas]
8 Hb_001405_190 0.0755779308 - - PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial [Jatropha curcas]
9 Hb_000205_130 0.075873568 - - calcium ion binding protein, putative [Ricinus communis]
10 Hb_003994_140 0.0764298281 - - conserved hypothetical protein [Ricinus communis]
11 Hb_039605_010 0.077380853 - - PREDICTED: lysine-specific demethylase JMJ25 isoform X1 [Jatropha curcas]
12 Hb_000138_130 0.0783949687 - - hypothetical protein JCGZ_25540 [Jatropha curcas]
13 Hb_008568_020 0.0805175052 - - PREDICTED: uncharacterized protein LOC105122325 isoform X3 [Populus euphratica]
14 Hb_000599_080 0.0820294698 - - PREDICTED: TOM1-like protein 1 [Malus domestica]
15 Hb_000983_120 0.0832983333 - - cyclin-dependent protein kinase, putative [Ricinus communis]
16 Hb_010362_030 0.0837690993 - - PREDICTED: QWRF motif-containing protein 2 [Jatropha curcas]
17 Hb_001077_030 0.0859785825 - - PREDICTED: somatic embryogenesis receptor kinase 1 isoform X2 [Jatropha curcas]
18 Hb_000042_340 0.0865614031 - - PREDICTED: vesicle-associated protein 4-1-like [Jatropha curcas]
19 Hb_000760_020 0.086924603 - - PREDICTED: E3 ubiquitin-protein ligase RNF185-like isoform X1 [Jatropha curcas]
20 Hb_010998_040 0.0879911874 transcription factor TF Family: MYB myb3r3, putative [Ricinus communis]

Gene co-expression network

sample Hb_000525_100 Hb_000525_100 Hb_009270_040 Hb_009270_040 Hb_000525_100--Hb_009270_040 Hb_005288_080 Hb_005288_080 Hb_000525_100--Hb_005288_080 Hb_002615_120 Hb_002615_120 Hb_000525_100--Hb_002615_120 Hb_003096_060 Hb_003096_060 Hb_000525_100--Hb_003096_060 Hb_032202_080 Hb_032202_080 Hb_000525_100--Hb_032202_080 Hb_000679_340 Hb_000679_340 Hb_000525_100--Hb_000679_340 Hb_000138_130 Hb_000138_130 Hb_009270_040--Hb_000138_130 Hb_000760_020 Hb_000760_020 Hb_009270_040--Hb_000760_020 Hb_000042_340 Hb_000042_340 Hb_009270_040--Hb_000042_340 Hb_003994_140 Hb_003994_140 Hb_009270_040--Hb_003994_140 Hb_000983_120 Hb_000983_120 Hb_009270_040--Hb_000983_120 Hb_000922_020 Hb_000922_020 Hb_005288_080--Hb_000922_020 Hb_005288_080--Hb_000679_340 Hb_000264_070 Hb_000264_070 Hb_005288_080--Hb_000264_070 Hb_001077_030 Hb_001077_030 Hb_005288_080--Hb_001077_030 Hb_000156_160 Hb_000156_160 Hb_005288_080--Hb_000156_160 Hb_001405_190 Hb_001405_190 Hb_002615_120--Hb_001405_190 Hb_008568_020 Hb_008568_020 Hb_002615_120--Hb_008568_020 Hb_002615_120--Hb_032202_080 Hb_000457_230 Hb_000457_230 Hb_002615_120--Hb_000457_230 Hb_000836_410 Hb_000836_410 Hb_002615_120--Hb_000836_410 Hb_000098_140 Hb_000098_140 Hb_002615_120--Hb_000098_140 Hb_003096_060--Hb_008568_020 Hb_154580_010 Hb_154580_010 Hb_003096_060--Hb_154580_010 Hb_003096_060--Hb_001077_030 Hb_000358_230 Hb_000358_230 Hb_003096_060--Hb_000358_230 Hb_000076_160 Hb_000076_160 Hb_003096_060--Hb_000076_160 Hb_001135_120 Hb_001135_120 Hb_003096_060--Hb_001135_120 Hb_032202_080--Hb_000457_230 Hb_001776_060 Hb_001776_060 Hb_032202_080--Hb_001776_060 Hb_138435_010 Hb_138435_010 Hb_032202_080--Hb_138435_010 Hb_032202_080--Hb_008568_020 Hb_032202_080--Hb_001405_190 Hb_022256_060 Hb_022256_060 Hb_000679_340--Hb_022256_060 Hb_000230_090 Hb_000230_090 Hb_000679_340--Hb_000230_090 Hb_005965_030 Hb_005965_030 Hb_000679_340--Hb_005965_030 Hb_003633_070 Hb_003633_070 Hb_000679_340--Hb_003633_070 Hb_008887_020 Hb_008887_020 Hb_000679_340--Hb_008887_020 Hb_000679_340--Hb_000922_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.87434 3.29234 4.27175 2.3622 2.8837 3.12367
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.56678 1.78664 0.982384 1.20843 1.84985

CAGE analysis