Hb_000264_070

Information

Type -
Description -
Location Contig264: 35722-45600
Sequence    

Annotation

kegg
ID rcu:RCOM_0935660
description hypothetical protein
nr
ID XP_012091566.1
description PREDICTED: uncharacterized protein LOC105649513 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JLP6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21411 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27587: 35852-45456
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000264_070 0.0 - - PREDICTED: uncharacterized protein LOC105649513 [Jatropha curcas]
2 Hb_004032_230 0.0609743315 - - PREDICTED: uncharacterized protein LOC105635143 [Jatropha curcas]
3 Hb_002477_250 0.0669894047 - - DNA-directed RNA polymerase I 49 kDa polypeptide, putative [Ricinus communis]
4 Hb_000023_320 0.0679582606 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001405_190 0.0689213969 - - PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial [Jatropha curcas]
6 Hb_001231_090 0.0699758206 - - PREDICTED: CCR4-NOT transcription complex subunit 10 isoform X1 [Jatropha curcas]
7 Hb_102438_030 0.0700153845 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 37-like isoform X1 [Jatropha curcas]
8 Hb_143766_110 0.0702557021 - - PREDICTED: asparagine--tRNA ligase, cytoplasmic 1 [Jatropha curcas]
9 Hb_000230_430 0.071587568 - - catalytic, putative [Ricinus communis]
10 Hb_001636_050 0.0722745466 transcription factor TF Family: NF-X1 nuclear transcription factor, X-box binding, putative [Ricinus communis]
11 Hb_000917_160 0.0754000793 - - PREDICTED: protein decapping 5 isoform X1 [Jatropha curcas]
12 Hb_000958_150 0.0768003667 - - Actin, putative [Ricinus communis]
13 Hb_055235_020 0.0770431771 - - PREDICTED: probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 isoform X1 [Jatropha curcas]
14 Hb_000723_110 0.078421798 - - PREDICTED: TSL-kinase interacting protein 1 [Jatropha curcas]
15 Hb_002325_040 0.0785349603 - - PREDICTED: uncharacterized protein LOC105645422 isoform X1 [Jatropha curcas]
16 Hb_000645_170 0.078615541 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000102_050 0.0794440428 transcription factor TF Family: RB conserved hypothetical protein [Ricinus communis]
18 Hb_001021_200 0.0796930608 desease resistance Gene Name: AAA PREDICTED: peroxisome biogenesis protein 6 [Jatropha curcas]
19 Hb_003470_030 0.0799722974 - - PREDICTED: E3 ubiquitin-protein ligase RNF126-like [Jatropha curcas]
20 Hb_000926_010 0.0800907722 - - PREDICTED: uncharacterized protein LOC105632975 [Jatropha curcas]

Gene co-expression network

sample Hb_000264_070 Hb_000264_070 Hb_004032_230 Hb_004032_230 Hb_000264_070--Hb_004032_230 Hb_002477_250 Hb_002477_250 Hb_000264_070--Hb_002477_250 Hb_000023_320 Hb_000023_320 Hb_000264_070--Hb_000023_320 Hb_001405_190 Hb_001405_190 Hb_000264_070--Hb_001405_190 Hb_001231_090 Hb_001231_090 Hb_000264_070--Hb_001231_090 Hb_102438_030 Hb_102438_030 Hb_000264_070--Hb_102438_030 Hb_001534_210 Hb_001534_210 Hb_004032_230--Hb_001534_210 Hb_004032_230--Hb_102438_030 Hb_000102_050 Hb_000102_050 Hb_004032_230--Hb_000102_050 Hb_004032_230--Hb_001231_090 Hb_003849_140 Hb_003849_140 Hb_004032_230--Hb_003849_140 Hb_002325_040 Hb_002325_040 Hb_002477_250--Hb_002325_040 Hb_000809_160 Hb_000809_160 Hb_002477_250--Hb_000809_160 Hb_001754_030 Hb_001754_030 Hb_002477_250--Hb_001754_030 Hb_003470_030 Hb_003470_030 Hb_002477_250--Hb_003470_030 Hb_001135_120 Hb_001135_120 Hb_002477_250--Hb_001135_120 Hb_000926_010 Hb_000926_010 Hb_000023_320--Hb_000926_010 Hb_001636_050 Hb_001636_050 Hb_000023_320--Hb_001636_050 Hb_001047_200 Hb_001047_200 Hb_000023_320--Hb_001047_200 Hb_000679_340 Hb_000679_340 Hb_000023_320--Hb_000679_340 Hb_143766_110 Hb_143766_110 Hb_000023_320--Hb_143766_110 Hb_002615_120 Hb_002615_120 Hb_001405_190--Hb_002615_120 Hb_001405_190--Hb_143766_110 Hb_007929_080 Hb_007929_080 Hb_001405_190--Hb_007929_080 Hb_004631_190 Hb_004631_190 Hb_001405_190--Hb_004631_190 Hb_000922_020 Hb_000922_020 Hb_001405_190--Hb_000922_020 Hb_010362_030 Hb_010362_030 Hb_001405_190--Hb_010362_030 Hb_002542_130 Hb_002542_130 Hb_001231_090--Hb_002542_130 Hb_002282_060 Hb_002282_060 Hb_001231_090--Hb_002282_060 Hb_004976_010 Hb_004976_010 Hb_001231_090--Hb_004976_010 Hb_001231_090--Hb_001534_210 Hb_005523_020 Hb_005523_020 Hb_001231_090--Hb_005523_020 Hb_030545_030 Hb_030545_030 Hb_102438_030--Hb_030545_030 Hb_102438_030--Hb_000102_050 Hb_007017_070 Hb_007017_070 Hb_102438_030--Hb_007017_070 Hb_000958_150 Hb_000958_150 Hb_102438_030--Hb_000958_150 Hb_000139_320 Hb_000139_320 Hb_102438_030--Hb_000139_320
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.4265 20.5608 17.6012 11.1358 15.6636 12.2983
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.46429 5.50247 5.67704 9.03833 9.83236

CAGE analysis